RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FAM166AQ6J272 317 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 ZNF813Q6ZN06 617 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 SPATA21Q7Z572 469 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 MYPOPQ86VE0 399 aaPredicted RBP12.77□□□□□ -0.36
CBX3-203ENST00000409747 PTOV1Q86YD1 416 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 OR5J2Q8NH18 312 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 CKAP2Q8WWK9 683 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 TMEM158Q8WZ71 300 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 SHARPINQ9H0F6 387 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 DYNLRB1Q9NP97 96 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 MED29Q9NX70 200 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 KCNS2Q9ULS6 477 aa12.77□□□□□ -0.36
CBX3-203ENST00000409747 YLPM1P49750 1951 aaKnown RBP12.77□□□□□ -0.37
CBX3-203ENST00000409747 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 RNF212BA8MTL3 300 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 CD79AP11912 226 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 MTPNP58546 118 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 SNTB2Q13425 540 aaKnown RBP12.76□□□□□ -0.37
CBX3-203ENST00000409747 NFYCQ13952 458 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 DUSP7Q16829 419 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 PHYHD1Q5SRE7 291 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 SLC26A7Q8TE54 656 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 RASSF5Q8WWW0 418 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 ZNF385DQ9H6B1 395 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 NOX3Q9HBY0 568 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 B3GNT2Q9NY97 397 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 CMAHPQ9Y471 501 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 M0QX08 132 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 LMX1BO60663 402 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 SERPINI2O75830 405 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 UBL3O95164 117 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 RAB36O95755 333 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 OPN1SWP03999 348 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 PCGF2P35227 344 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 CSNK1A1P48729 337 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 CAMK2DQ13557 499 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 ENTPD8Q5MY95 495 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 TTC33Q6PID6 262 aaPredicted RBP12.76□□□□□ -0.37
CBX3-203ENST00000409747 LINC00114Q6XXX2 140 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 HDXQ7Z353 690 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 SVOPLQ8N434 492 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 OR6T1Q8NGN1 323 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 TXNDC15Q96J42 360 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 MPP4Q96JB8 637 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 FOXN4Q96NZ1 517 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 DOK1Q99704 481 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 FOXB1Q99853 325 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 WFDC6Q9BQY6 131 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 SLC19A3Q9BZV2 496 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
CBX3-203ENST00000409747 MRGBPQ9NV56 204 aa12.76□□□□□ -0.37
CBX3-203ENST00000409747 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
CBX3-203ENST00000409747 LRRN3E7EW58 273 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 HLA-HP01893 362 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 DAOP14920 347 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 B4GALT1P15291 398 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 ZNF23P17027 643 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 HNF1AP20823 631 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 ZNF74Q16587 644 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 TRMT5Q32P41 509 aaKnown RBP12.75□□□□□ -0.37
CBX3-203ENST00000409747 METTL21CQ5VZV1 264 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 KRT80Q6KB66 452 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 NHLRC1Q6VVB1 395 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 RETREG3Q86VR2 466 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 GPR32P1Q8NGA4 272 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 ADAMTS16Q8TE57 1224 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 THOC1Q96FV9 657 aaKnown RBP12.75□□□□□ -0.37
CBX3-203ENST00000409747 BPESC1Q9GZL8 116 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 VIPAS39Q9H9C1 493 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 NPHS2Q9NP85 383 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 NANSQ9NR45 359 aa12.75□□□□□ -0.37
CBX3-203ENST00000409747 ARGLU1Q9NWB6 273 aaPredicted RBP12.75□□□□□ -0.37
CBX3-203ENST00000409747 FBN3Q75N90 2809 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 LOC100289279A0A1B0GTE1 492 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 TRAPPC13A5PLN9 417 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 C11orf98E9PRG8 122 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 EDF1O60869 148 aaKnown RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 ZNF14P17017 642 aaPredicted RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 CD247P20963 164 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 NR4A1P22736 598 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 GIFP27352 417 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 LSP1P33241 339 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 EVX1P49640 407 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 BIDP55957 195 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 RPS23P62266 143 aaKnown RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 GALK2Q01415 458 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 SELPLGQ14242 412 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 NPTX1Q15818 432 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 PIWIL3Q7Z3Z3 882 aaKnown RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 OR6X1Q8NH79 312 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 VANGL1Q8TAA9 524 aaPredicted RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 SH3GL1Q99961 368 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
CBX3-203ENST00000409747 PCDHAC1Q9H158 963 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 ZNF229Q9UJW7 825 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 A0A0G2JND7 137 aa12.74□□□□□ -0.37
CBX3-203ENST00000409747 STAMBPO95630 424 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms