RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 NEIL1Q96FI4 390 aaPredicted RBP3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 APIPQ96GX9 242 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 PBKQ96KB5 322 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 NSUN5Q96P11 429 aaKnown RBP3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ZNF382Q96SR6 550 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 PCGF1Q9BSM1 259 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 DESI2Q9BSY9 194 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ACPTQ9BZG2 426 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 OR51B6Q9H340 312 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 RANBP3Q9H6Z4 567 aaPredicted RBP3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 GPR35Q9HC97 309 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 EXOSC3Q9NQT5 275 aaKnown RBP3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 BIRC6Q9NR09 4857 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 EXD2Q9NVH0 621 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ADPRHL2Q9NX46 363 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SIRT5Q9NXA8 310 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 NOP53Q9NZM5 478 aaKnown RBP3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SH3BP4Q9P0V3 963 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 EIF3KQ9UBQ5 218 aaKnown RBP3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 RNF14Q9UBS8 474 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CLN8Q9UBY8 286 aa3.23□□□□□ -1.89
RNU6ATAC-201ENST00000408749 WNK2Q9Y3S1 2297 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 A0A096LPI6 279 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 IGHV1-69DA0A0B4J2H0 117 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 KIR2DS1A0A191URI9 304 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 WI2-2373I1.2A0A1W2PRP0 233 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TCRBV9S1A1TA0A576 114 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TMEM72A0PK05 275 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SERTM1A2A2V5 107 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 HMX2A2RU54 273 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 PRAMEF27A3QJZ7 478 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 LIPT2A6NK58 231 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 FAM159BA6NKW6 160 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CEACAM18A8MTB9 384 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 GOLGA6L6A8MZA4 724 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TMEM229AB2RXF0 380 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 NPIPB9F8W1W9 429 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 H3BQF6 201 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 H3BSA7 217 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 M0R3G1 203 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TOX4O94842 621 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SNAP29O95721 258 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CLPTM1O96005 669 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 IGHV1-69P01742 117 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 IGHV1-46P01743 117 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 IGHV3-13P01766 116 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SERPINA5P05154 406 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 C2P06681 752 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CD55P08174 381 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 RPS17P08708 135 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 VSIG10L2P0DP72 767 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TAC1P20366 129 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 PAICSP22234 425 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 EEF1B2P24534 225 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TACR3P29371 465 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 APLNRP35414 380 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SOAT1P35610 550 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 HPCAL1P37235 193 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ANP32AP39687 249 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CRATP43155 626 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 IDH2P48735 452 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 PITPNBP48739 271 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 NPY4RP50391 375 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SEC61A1P61619 476 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 COPZ1P61923 177 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 RAB39AQ14964 217 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 LSM12Q3MHD2 195 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SLC36A2Q495M3 483 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ATP6AP1LQ52LC2 224 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ARSJQ5FYB0 599 aaPredicted RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 COX20Q5RI15 118 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CD276Q5ZPR3 534 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CLEC6AQ6EIG7 209 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 EMBQ6PCB8 327 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 UNQ9370/PRO34162Q6UXP9 181 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 LINGO2Q7L985 606 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 LRRC28Q86X40 367 aaPredicted RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 RNF130Q86XS8 419 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 KLBQ86Z14 1044 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CENPLQ8N0S6 344 aaPredicted RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 NATD1Q8N6N6 113 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 PNLDC1Q8NA58 520 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 FAM71CQ8NEG0 241 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SDR9C7Q8NEX9 313 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 OR1J1Q8NGS3 322 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 SFXN5Q8TD22 340 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ZNF483Q8TF39 744 aaPredicted RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 NPRL2Q8WTW4 380 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 DDB2Q92466 427 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 NSMAFQ92636 917 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 CIDECQ96AQ7 238 aaPredicted RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 RBMXL1Q96E39 390 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 FAM120BQ96EK7 910 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 METTL2AQ96IZ6 378 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TMEM237Q96Q45 408 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 TSPAN32Q96QS1 320 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 PRPF18Q99633 342 aaKnown RBP3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 ULBP2Q9BZM5 246 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 MMP28Q9H239 520 aa3.22□□□□□ -1.89
RNU6ATAC-201ENST00000408749 REEP4Q9H6H4 257 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms