RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 FBXO17Q96EF6 278 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 MOGAT1Q96PD6 335 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 RAB1BQ9H0U4 201 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 C1orf198Q9H425 327 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 CCDC134Q9H6E4 229 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 SAR1AQ9NR31 198 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 SEC14L4Q9UDX3 406 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 GDF2Q9UK05 429 aaPredicted RBP7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC7A7Q9UM01 511 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 CSPG4Q6UVK1 2322 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 A0A1W2PRG6 482 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 MCIDASD6RGH6 385 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 MS4A18H0YCH9 400 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 FXYD1O00168 92 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 FBP2O00757 339 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 RNF13O43567 381 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 CD5LO43866 347 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 TPST2O60704 377 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 SERPINI2O75830 405 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 CH25HO95992 272 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 BCL10O95999 233 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 PTHP01270 115 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 IGHG1P01857 330 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 IFNGR1P15260 489 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 NPR2P20594 1047 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 PDLIM4P50479 330 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 DAP3P51398 398 aaKnown RBP7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 GALK2Q01415 458 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 LGALS3BPQ08380 585 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 LOXL1Q08397 574 aaPredicted RBP7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 NPRL3Q12980 569 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 SWI5Q1ZZU3 235 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 MS4A18Q3C1V0 323 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 NRN1LQ496H8 165 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 CARD17Q5XLA6 110 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 LINGO2Q7L985 606 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 PIWIL3Q7Z3Z3 882 aaKnown RBP7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 MDP1Q86V88 176 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 CARM1Q86X55 608 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 CALHM3Q86XJ0 350 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 OR10H5Q8NGA6 315 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 RP9Q8TA86 221 aaKnown RBP7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC25A44Q96H78 314 aaPredicted RBP7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 FOXB1Q99853 325 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 PIMREGQ9BSJ6 248 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF426Q9BUY5 554 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 PRR14Q9BWN1 585 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 NDEL1Q9GZM8 345 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 NELFAQ9H3P2 528 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 DYNLRB1Q9NP97 96 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 MED29Q9NX70 200 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 SH3GLB1Q9Y371 365 aa7.9□□□□□ -1.14
SNORD88A-201ENST00000408314 FN1P02751 2386 aaKnown RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 LOC390937A0A1W2PQ73 354 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC22A23A1A5C7 686 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 ELOVL7A1L3X0 281 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 INAFM1C9JVW0 142 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 C11orf98E9PRG8 122 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 KPNA4O00629 521 aaPredicted RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 NDUFS7O75251 213 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 HPRP00739 348 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 IFNA2P01563 188 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 MT-ND1P03886 318 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 OR4A8P0C604 315 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 ASAH2BP0C7U1 165 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 OR8G3PP0DMU2 310 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 CD79AP11912 226 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 HLA-DOBP13765 273 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 B4GALT1P15291 398 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 PTNP21246 168 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 GZMMP51124 257 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF84P51523 738 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 BIDP55957 195 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 TUBA1BP68363 451 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 TUBA4AP68366 448 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 ST3GAL3Q11203 375 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 SNTB2Q13425 540 aaKnown RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 CAMK2DQ13557 499 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 DAG1Q14118 895 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 TAF11Q15544 211 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 ADIPOQQ15848 244 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 ANKDD1AQ495B1 522 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC36A2Q495M3 483 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 LRRC23Q53EV4 343 aaPredicted RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 RABL3Q5HYI8 236 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM53Q6P2H8 277 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 VHLLQ6RSH7 139 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 DEF8Q6ZN54 512 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 TUBA1AQ71U36 451 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 MICU2Q8IYU8 434 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 FNDC8Q8TC99 324 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 C10orf82Q8WW14 230 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM239Q8WW34 195 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 NEU4Q8WWR8 484 aaPredicted RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 SGTBQ96EQ0 304 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 PRRC1Q96M27 445 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 VRK1Q99986 396 aaPredicted RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 HOPXQ9BPY8 73 aaPredicted RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 EMC6Q9BV81 110 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms