RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 AKR7A3O95154 331 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 FARS2O95363 451 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 GPANK1O95872 356 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 GHRHP01286 108 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ADRB3P13945 408 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 MAOBP27338 520 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 FAUP35544 74 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF234Q14588 700 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 MLF2Q15773 248 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC16A13Q7RTY0 426 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM17Q86X19 198 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 LRRC25Q8N386 305 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 RAB42Q8N4Z0 105 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 THAP6Q8TBB0 222 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 TRIM43Q96BQ3 446 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ADAD1Q96M93 576 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 VRK1Q99986 396 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 CRB3Q9BUF7 120 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ATG2BQ96BY7 2078 aa9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 ASCC3Q8N3C0 2202 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-202ENST00000398738 KIF26AQ9ULI4 1882 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 TRAV20A0A0B4J274 112 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 A0A1B0GWA3 101 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2AT4A6NND4 320 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 CTDSPLO15194 276 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OGG1O15527 345 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 CTNSO60931 367 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ADAM11O75078 769 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC6A6P31641 620 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 AQP2P41181 271 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 AKR1C3P42330 323 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 TM4SF4P48230 202 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ELFN2Q5R3F8 820 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DCST2Q5T1A1 773 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM71Q6P5X7 295 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 RHOUQ7L0Q8 258 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 KCTD9Q7L273 389 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 CD163Q86VB7 1156 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 GATSQ8NAP1 163 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 STEAP2Q8NFT2 490 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 SFXN5Q8TD22 340 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 RGP1Q92546 391 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 PRSS16Q9NQE7 514 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 COMMD9Q9P000 198 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 EMC3Q9P0I2 261 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 PURGQ9UJV8 347 aaKnown RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 CES1P1Q9UKY3 287 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF281Q9Y2X9 895 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF337Q9Y3M9 751 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 SZT2Q5T011 3432 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OR6C68A6NDL8 312 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 SNRPGP15A8MWD9 76 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 EEF1E1-BLOC1S5C9J1V9 151 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 AGPAT2O15120 278 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2T7P0C7T2 308 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 RD3LP0DJH9 198 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 CNR1P21554 472 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DDX6P26196 483 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 BDKRB2P30411 391 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 PGDP52209 483 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ACTA2P62736 377 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ACTG2P63267 376 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 HTRA3P83110 453 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 SRSF3P84103 164 aaKnown RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2W3Q7Z3T1 314 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 NRROSQ86YC3 692 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 LDLRAD3Q86YD5 345 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 NRSN1Q8IZ57 195 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 KREMEN2Q8NCW0 462 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OR2T27Q8NH04 317 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 NSMAFQ92636 917 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM106AQ96A25 262 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 HAVCR1Q96D42 359 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 LCORQ96JN0 433 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF681Q96N22 645 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 MS4A4EQ96PG1 132 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 FAM83CQ9BQN1 747 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ATG5Q9H1Y0 275 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 TRPV4Q9HBA0 871 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ADAM29Q9UKF5 820 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 C17orf113A0A1B0GUU1 675 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 C13orf42A0A1B0GVH6 325 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 A0A1B0GW55 424 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 OR5H14A6NHG9 310 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 HMSDA8MTL9 139 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 PRRT4C9JH25 899 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 AMY2AP04746 511 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DUX4L2P0CJ85 424 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DUX4L3P0CJ86 424 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DUX4L4P0CJ87 422 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DUX4L5P0CJ88 424 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DUX4L6P0CJ89 424 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 DUX4L7P0CJ90 424 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF28P17035 718 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 CD53P19397 219 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 NFYBP25208 207 aa9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 EEF1A1P68104 462 aaKnown RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 RBM39Q14498 530 aaKnown RBP9.01□□□□□ -0.97
PTCHD4-202ENST00000398738 LIPNQ5VXI9 398 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms