RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 M0R233 179 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 PRAMEF2O60811 474 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 S100A6P06703 90 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ERGP11308 486 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 FCARP24071 287 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 FGF9P31371 208 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF136P52737 540 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 GPLD1P80108 840 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ARHGAP40Q5TG30 622 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 YOD1Q5VVQ6 348 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SLC35D2Q76EJ3 337 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 LRRC28Q86X40 367 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 C19orf47Q8N9M1 422 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OR51D1Q8NGF3 324 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ZFAND1Q8TCF1 268 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 METTL21AQ8WXB1 218 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 S100A16Q96FQ6 103 aaKnown RBP4.52□□□□□ -1.69
SMAD4-202ENST00000398417 CITED1Q99966 193 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ERVMER34-1Q9H9K5 563 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 HRASLSQ9HDD0 168 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 INPP5EQ9NRR6 644 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SIGLEC7Q9Y286 467 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 KMT2EQ8IZD2 1858 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 E9PQ18 207 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 SLC16A7O60669 478 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 PTP4A3O75365 173 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 HYAL1Q12794 435 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 CDK5R1Q15078 307 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 BCL2A1Q16548 175 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 Q6ZS52 159 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 OVCH1Q7RTY7 1134 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ALG12Q9BV10 488 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 ADGRL4Q9HBW9 690 aa4.52□□□□□ -1.69
SMAD4-202ENST00000398417 IGKV1D-16P01601 117 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 RAB5CP51148 216 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 AGFG1P52594 562 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 UBXN2BQ14CS0 331 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 POU2AF1Q16633 256 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 Q5BKY6 102 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 HIST2H3PS2Q5TEC6 136 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 FAM181AQ8N9Y4 354 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TSLPQ969D9 159 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 NXPE2Q96DL1 559 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ELMOD3Q96FG2 381 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TBL1XR1Q9BZK7 514 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ATG5Q9H1Y0 275 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 FAM60AQ9NP50 221 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 MEPEQ9NQ76 525 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 K7EQS6 105 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF593O00488 134 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SCDO00767 359 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 BRINP1O60477 761 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 AHSA1O95433 338 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 IGHA1P01876 353 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ANXA7P20073 488 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 RBMS1P29558 406 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TNFRSF4P43489 277 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 DIO1P49895 249 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SORDQ00796 357 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 GUCA2AQ02747 115 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 OPCMLQ14982 345 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 C4orf46Q504U0 113 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CARD17Q5XLA6 110 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 DMKNQ6E0U4 476 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PEG10Q86TG7 708 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 JAGN1Q8N5M9 183 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 STACQ99469 402 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PRODH2Q9UF12 536 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SLC6A5Q9Y345 797 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CHP2O43745 196 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CTNSO60931 367 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TMEM11P17152 192 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 VEGFCP49767 419 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TPMTP51580 245 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SKP1P63208 163 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 EEF1A1P68104 462 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 BDH1Q02338 343 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ALKBH1Q13686 389 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PRICKLE4Q2TBC4 344 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PCGF3Q3KNV8 242 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 NLRC3Q7RTR2 1065 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TMPRSS9Q7Z410 1059 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TMED4Q7Z7H5 227 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF227Q86WZ6 799 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 GPALPP1Q8IXQ4 340 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SLC35F3Q8IY50 421 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 OR51Q1Q8NH59 317 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 B3GNT4Q9C0J1 378 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 KCNK15Q9H427 330 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 UPB1Q9UBR1 384 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SDK1Q7Z5N4 2213 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PGCP20142 388 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CD1CP29017 333 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 FOXC1Q12948 553 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ELOCQ15369 112 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 FAM189A2Q15884 450 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LRRC37A5PQ49AS3 106 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TCTE1Q5JU00 501 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 WDR45BQ5MNZ6 344 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms