RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TVP23AA6NH52 213 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 IFITM5A6NNB3 132 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 CENPXA8MT69 81 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 AIPO00170 330 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 PSMD9O00233 223 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 ARHGEF9O43307 516 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 EEF1E1O43324 174 aaKnown RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 DCNP07585 359 aaKnown RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 MAPK3P27361 379 aaPredicted RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 HOXA6P31267 233 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 DLX5P56178 289 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 RPL27P61353 136 aaKnown RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 NR0B2Q15466 257 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 SLC36A2Q495M3 483 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 Q499Y3 187 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 NKAIN1Q4KMZ8 207 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 LYSMD4Q5XG99 296 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 MAMSTRQ6ZN01 415 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 OR5AK2Q8NH90 309 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 NUBPLQ8TB37 319 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 HSD17B8Q92506 261 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 YIPF5Q969M3 257 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 SLC7A5P2Q9GIP4 190 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 TXNIPQ9H3M7 391 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 DDX28Q9NUL7 540 aaKnown RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 VSX1Q9NZR4 365 aaPredicted RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 FRRS1LQ9P0K9 344 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 ATXN7L1Q9ULK2 861 aaPredicted RBP15.18■□□□□ 0.02
NUP50-202ENST00000396096 SIT1Q9Y3P8 196 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 CACNG2Q9Y698 323 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 U3KQA8 63 aa15.18■□□□□ 0.02
NUP50-202ENST00000396096 CABIN1Q9Y6J0 2220 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 A0A0B4J203 849 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 CCDC163A0A0D9SF12 145 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 A0A1B0GVC2 190 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 A6NIN4 97 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 ACOD1A6NK06 481 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 A8MV72 311 aaPredicted RBP15.17■□□□□ 0.02
NUP50-202ENST00000396096 XKRYO14609 159 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 ZNF432O94892 652 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 BTCP35070 178 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 BLVRAP53004 296 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 TIGD3Q6B0B8 471 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 POMZP3Q6PJE2 187 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 SHISA6Q6ZSJ9 500 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 PM20D2Q8IYS1 436 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 TCTE3Q8IZS6 198 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 DTX3Q8N9I9 347 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 OR6N2Q8NGY6 317 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 LGALS14Q8TCE9 139 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 DUSP19Q8WTR2 217 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 RNF138Q8WVD3 245 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 METTL21AQ8WXB1 218 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 RNF170Q96K19 258 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 ABCG5Q9H222 651 aa15.17■□□□□ 0.02
NUP50-202ENST00000396096 ARPC4-TTLL3A0A0A6YYG9 625 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 IGHV3-20A0A0C4DH32 117 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 PRSS37A4D1T9 235 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 ANKUB1A6NFN9 424 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 OR4C45A6NMZ5 311 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 INMT-MINDY4F8WBC2 141 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 PLPP3O14495 311 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 OR2T1O43869 369 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 HEXBP07686 556 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 SUMO3P55854 103 aaPredicted RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 ACKR1Q16570 336 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 COL28A1Q2UY09 1125 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 FDX2Q6P4F2 183 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 GUSBP11Q6P575 273 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 ASB18Q6ZVZ8 466 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 SLC38A9Q8NBW4 561 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 OTOSQ8NHW6 89 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 ZNF671Q8TAW3 534 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 TMEM234Q8WY98 164 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 ST8SIA1Q92185 356 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 SLC25A36Q96CQ1 311 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 TP63Q9H3D4 680 aaPredicted RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 RANGRFQ9HD47 186 aaPredicted RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 MRPL39Q9NYK5 338 aaKnown RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 B9D1Q9UPM9 204 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 V9GY05 133 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 C11orf98E9PRG8 122 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 ALOX12BO75342 701 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 RPP14O95059 124 aaKnown RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 AHSA1O95433 338 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 ARSBP15848 533 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 NAGAP17050 411 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 DPP4P27487 766 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 BICRALQ6AI39 1079 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 FAM199XQ6PEV8 388 aaPredicted RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 DPY19L4Q7Z388 723 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 OR2G2Q8NGZ5 317 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 SAP25Q8TEE9 199 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 CAPSLQ8WWF8 208 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 HGDQ93099 445 aa15.16■□□□□ 0.02
NUP50-202ENST00000396096 C7orf50Q9BRJ6 194 aaKnown RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 TSPAN10Q9H1Z9 355 aaPredicted RBP15.16■□□□□ 0.02
NUP50-202ENST00000396096 TRBV5-7A0A0A0MS05 114 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 A0A1W2PPC1 479 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 A0A1W2PQM1 296 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms