RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 DDTLA6NHG4 134 aaPredicted RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 GRM7Q14831 915 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 OXA1LQ15070 435 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 SOCS6O14544 535 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 NME2P1O60361 137 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 XCR1P46094 333 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 TECRLQ5HYJ1 363 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 HENMT1Q5T8I9 393 aaKnown RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 PHYHIPQ92561 330 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 A0A1W2PPQ1 181 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 TYROBPO43914 113 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 OR7C2O60412 319 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 SLC22A24Q8N4F4 322 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 CXorf58Q96LI9 332 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 GPR174Q9BXC1 333 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 KCNK6Q9Y257 313 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 CCL23P55773 120 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 WNT7BP56706 349 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 KIAA1024LP59773 190 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 ZNF85Q03923 595 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 FCN2Q15485 313 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 WBP2NLQ6ICG8 309 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 Q6ZN92 141 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 LYSMD1Q96S90 227 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 KCNJ15Q99712 375 aa12.5□□□□□ -0.41
USP49-203ENST00000394253 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
USP49-203ENST00000394253 SSSCA1O60232 199 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 SLC25A6P12236 298 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 DUSP28Q4G0W2 176 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 MUCL1Q96DR8 90 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 LMAN1LQ9HAT1 526 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 TRAPPC1Q9Y5R8 145 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF487B1APH4 448 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 DDOSTP39656 456 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 UBQLN3Q9H347 655 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 RPS24P62847 133 aaKnown RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF805Q5CZA5 627 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 NLRC3Q7RTR2 1065 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 SMOQ99835 787 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 SELENOIQ9C0D9 397 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 BICRAQ9NZM4 1560 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 SPCS3P61009 180 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 Q3ZCU0 254 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 NETO1Q8TDF5 533 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 KLHDC7BQ96G42 594 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 DYNLRB1Q9NP97 96 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 DECR2Q9NUI1 292 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ARHGEF28Q8N1W1 1705 aaKnown RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 C1QBP02746 253 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 SCG5P05408 212 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 RRASP10301 218 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 GM2AP17900 193 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 IL17AQ16552 155 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 MS4A13Q5J8X5 152 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 Q6ZVU0 165 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 LGALS14Q8TCE9 139 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 PIGCQ92535 297 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 SLC6A18Q96N87 628 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 CIB3Q96Q77 187 aaPredicted RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 RANBP9Q96S59 729 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF768Q9H5H4 540 aaKnown RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF860A6NHJ4 632 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 H3BML4 177 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 HSPB6O14558 160 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 RAF1P04049 648 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 GALNT2Q10471 571 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 PAFAH1B3Q15102 231 aaKnown RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 NADSYN1Q6IA69 706 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 Q6ZTK2 550 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 SFXN2Q96NB2 322 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ELF4Q99607 663 aaPredicted RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 SDK2Q58EX2 2172 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF816-ZNF321PA0A0X1KG74 233 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 UQCRFS1P47985 274 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 NPSR1Q6W5P4 371 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF765Q7L2R6 523 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 ZNF845Q96IR2 970 aaPredicted RBP12.49□□□□□ -0.41
USP49-203ENST00000394253 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 KCNK15Q9H427 330 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 RAB22AQ9UL26 194 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 CSAG2Q9Y5P2 127 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
USP49-203ENST00000394253 WNT10BO00744 389 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 CRISP2P16562 243 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 C5AR1P21730 350 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 EMX1Q04741 257 aaPredicted RBP12.48□□□□□ -0.41
USP49-203ENST00000394253 DCAF12L1Q5VU92 463 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 PRR27Q6MZM9 219 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 CDRT4Q8N9R6 151 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 GORASP2Q9H8Y8 452 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 RPLP1P05386 114 aaKnown RBP12.48□□□□□ -0.41
USP49-203ENST00000394253 MFSD12Q6NUT3 480 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 CDHR3Q6ZTQ4 885 aa12.48□□□□□ -0.41
USP49-203ENST00000394253 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms