RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SEC23BQ15437 767 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 ALG10Q5BKT4 473 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 LINGO2Q7L985 606 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 CDC20BQ86Y33 519 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 C17orf78Q8N4C9 275 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 OR51A7Q8NH64 312 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 FAM46AQ96IP4 442 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 ALPK1Q96QP1 1244 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 TNFRSF13CQ96RJ3 184 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 FUZQ9BT04 418 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 CRLF2Q9HC73 371 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 AURKCQ9UQB9 309 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 PRR14LQ5THK1 2151 aa16.69■□□□□ 0.26
PDLIM7-204ENST00000393546 SIAH2O43255 324 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 HOXC12P31275 282 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 MAGEA2P43356 314 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 CSNK1A1P48729 337 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 DAP3P51398 398 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 NR1H2P55055 460 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 SH3BGRP55822 239 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 PRPS1P60891 318 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 MELKQ14680 651 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 ZBED5Q49AG3 693 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 C1QTNF12Q5T7M4 302 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 HDDC2Q7Z4H3 204 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 OR1K1Q8NGR3 316 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 OR52N5Q8NH56 324 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 ZNF566Q969W8 418 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 SLC25A44Q96H78 314 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 BOD1Q96IK1 185 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 NDEL1Q9GZM8 345 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 MMADHCQ9H3L0 296 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 SLC17A5Q9NRA2 495 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 POMPQ9Y244 141 aa16.68■□□□□ 0.26
PDLIM7-204ENST00000393546 TRAV27A0A087WT01 109 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 TNFRSF11BO00300 401 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 CDC42EP2O14613 210 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 RAP2AP10114 183 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 HOXB6P17509 224 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 IFNGR2P38484 337 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 OMPP47874 163 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 HMGA2P52926 109 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 CTXN1P60606 82 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 RPS4XP62701 263 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 CBX1P83916 185 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 ARF1P84077 181 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 TAF11Q15544 211 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 ACKR1Q16570 336 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 CEACAM16Q2WEN9 425 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 PHYHD1Q5SRE7 291 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 ANKRD16Q6P6B7 361 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 CCDC121Q6ZUS5 278 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 SPATA24Q86W54 205 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 WDFY1Q8IWB7 410 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 OR13C2Q8NGS9 318 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 BCL2L2Q92843 193 aaPredicted RBP16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 TMEM54Q969K7 222 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 PLPPR2Q96GM1 343 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 ULBP2Q9BZM5 246 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 TXNIPQ9H3M7 391 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 ESRP2Q9H6T0 727 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 GLTPQ9NZD2 209 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 STX18Q9P2W9 335 aaKnown RBP16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 AMDHD2Q9Y303 409 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 SLC25A15Q9Y619 301 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 FBN2P35556 2912 aa16.67■□□□□ 0.26
PDLIM7-204ENST00000393546 A0A1W2PR80 420 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 DHRS12A0PJE2 317 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 NPIPB13A6NJU9 1138 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 NPIPB4C9JG80 1138 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 OR10H3O60404 316 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 WNT11O96014 354 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 IGHG1P01857 330 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 HOXB1P14653 301 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 KLHL24Q6TFL4 600 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 ADGRG5Q8IZF4 528 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 LINC00471Q8N535 108 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 WDR31Q8NA23 367 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 ASB10Q8WXI3 467 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 CHID1Q9BWS9 393 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 LRMDAQ9H2I8 198 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 SLC7A8Q9UHI5 535 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 EDARQ9UNE0 448 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 POFUT2Q9Y2G5 429 aa16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 MAGED1Q9Y5V3 778 aaPredicted RBP16.66■□□□□ 0.26
PDLIM7-204ENST00000393546 TACC2O95359 2948 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 UNC119BA6NIH7 251 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 ZNF99A8MXY4 864 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 CENPBD1B2RD01 187 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 EBAG9O00559 213 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 PTP4A3O75365 173 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 ACADSP16219 412 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 LOXP28300 417 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 RPL4P36578 427 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 LIMS1P48059 325 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 CLRN1P58418 232 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 UBE2NP61088 152 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 FHL1Q13642 323 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 TBRG1Q3YBR2 411 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms