RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 VDAC2P45880 294 aaPredicted RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 CD151P48509 253 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 HNRNPA3P51991 378 aaKnown RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 SLC25A1P53007 311 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 RPS15AP62244 130 aaKnown RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 SELENOTP62341 195 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 IRX3P78415 501 aaPredicted RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LCN2P80188 198 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 TGFBR3Q03167 851 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ZFP36L1Q07352 338 aaKnown RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 SLAQ13239 276 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 STK38Q15208 465 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 CYTH1Q15438 398 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 KCTD19Q17RG1 926 aaPredicted RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 HSDL1Q3SXM5 330 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 TIMM50Q3ZCQ8 353 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 PAN3Q58A45 887 aaKnown RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 XKR4Q5GH76 650 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LIN9Q5TKA1 542 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 GPR157Q5UAW9 335 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ZNF772Q68DY9 489 aaPredicted RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ULK3Q6PHR2 472 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 CNIH2Q6PI25 160 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 C2orf66Q6UXQ4 117 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 DNM1P46Q6ZS02 220 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 FAM220AQ7Z4H9 259 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LHFPL3Q86UP9 236 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ZBED8Q8IZ13 594 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 CMTM8Q8IZV2 173 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 RDH10Q8IZV5 341 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 PDIK1LQ8N165 341 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 SLC39A11Q8N1S5 342 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 C6orf223Q8N319 242 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 PRELID2Q8N945 189 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ZNF557Q8N988 423 aaPredicted RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 HSD17B11Q8NBQ5 300 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 INO80EQ8NBZ0 244 aaPredicted RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 CSNK1G2-AS1Q8NCQ2 148 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 OR51L1Q8NGJ5 315 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 OR9G1Q8NH87 305 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LILRB4Q8NHJ6 448 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LRRC20Q8TCA0 184 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LKAAEAR1Q8TD35 194 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 AGAP11Q8TF27 550 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ASZ1Q8WWH4 475 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 CHCHD10Q8WYQ3 142 aaPredicted RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 DNASE2BQ8WZ79 361 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 MYDGFQ969H8 173 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 NEIL2Q969S2 332 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 APH1AQ96BI3 265 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 C19orf60Q96EN9 201 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ITCHQ96J02 903 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ATP6V1G3Q96LB4 118 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LINC00479Q96M42 142 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 TSG101Q99816 390 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 VGLL1Q99990 258 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 SOSTQ9BQB4 213 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 GAL3ST2Q9H3Q3 398 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 PIGUQ9H490 435 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 PTGES2Q9H7Z7 377 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 PANK3Q9H999 370 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 GNB4Q9HAV0 340 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 LY9Q9HBG7 655 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 TMEM165Q9HC07 324 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 MRPL47Q9HD33 250 aaKnown RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ACP6Q9NPH0 428 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ZC4H2Q9NQZ6 224 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ZNHIT6Q9NWK9 470 aaKnown RBP1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 HRASLS2Q9NWW9 162 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 IFNKQ9P0W0 207 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 ING4Q9UNL4 249 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 FLVCR2Q9UPI3 526 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 SLC17A4Q9Y2C5 497 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 PIK3R4Q99570 1358 aa1.47□□□□□ -2.17
SNORA48.1-201ENST00000390879 IGHV1OR15-1A0A075B7D0 117 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 IGHV3OR16-13A0A075B7E8 117 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 KCNE1BA0A087WTH5 132 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 IGHV3-35A0A0C4DH35 117 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 A0A0J9YYE9 177 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 GLYATL1P3A0A0U1RQE8 302 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 ZNF816-ZNF321PA0A0X1KG74 233 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 ZNF99A8MXY4 864 aaPredicted RBP1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 ZNF879B4DU55 563 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 PRR23D1E9PI22 279 aaPredicted RBP1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 E9PQ18 207 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 PLPP1O14494 284 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 NDUFAB1O14561 156 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 ZBTB5O15062 677 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 RNF113AO15541 343 aaKnown RBP1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 LINC01565O15544 149 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 PI15O43692 258 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 KDELR3O43731 214 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 MGRN1O60291 552 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 SLC19A2O60779 497 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 HSBP1O75506 76 aa1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 FARS2O95363 451 aaKnown RBP1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 FGFR1OPO95684 399 aaKnown RBP1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 SNAI1O95863 264 aaPredicted RBP1.46□□□□□ -2.18
SNORA48.1-201ENST00000390879 CD160O95971 181 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms