RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MIER3Q7Z3K6 550 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ITIH5Q86UX2 942 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PAQR7Q86WK9 346 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IFNEQ86WN2 208 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TPH2Q8IWU9 490 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TEX11Q8IYF3 940 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CLECL1Q8IZS7 167 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 Q8N2B8 174 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RPRMLQ8N4K4 120 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2C3Q8N628 320 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CHST4Q8NCG5 386 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2Z1Q8NG97 314 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4X2Q8NGF9 303 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 OR5C1Q8NGR4 320 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 OR52J3Q8NH60 311 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NFKBIDQ8NI38 313 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PNPT1Q8TCS8 783 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SPACA4Q8TDM5 124 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SDR42E1Q8WUS8 393 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SEPT8Q92599 483 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TMBIM1Q969X1 311 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 EEF1AKMT3Q96AZ1 226 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TMIGD2Q96BF3 282 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 APH1AQ96BI3 265 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 AP2M1Q96CW1 435 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SPACA9Q96E40 222 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 HOOK2Q96ED9 719 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CCDC51Q96ER9 411 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 VMP1Q96GC9 406 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 BTN2A3PQ96KV6 586 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PRRC1Q96M27 445 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TSSK3Q96PN8 268 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ERGIC2Q96RQ1 377 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TRIB3Q96RU7 358 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RMDN3Q96TC7 470 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR22Q99680 433 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 BAG1Q99933 345 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 GAL3ST1Q99999 423 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 P2RY13Q9BPV8 354 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NCAPGQ9BPX3 1015 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NUDT16L1Q9BRJ7 211 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 Q9BRP9 147 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM246Q9BRR3 403 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MARVELD1Q9BSK0 173 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 FUZQ9BT04 418 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM59Q9BXS4 323 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 KRT23Q9C075 422 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SELENOIQ9C0D9 397 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 KLHL4Q9C0H6 718 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IL22Q9GZX6 179 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CHRNA10Q9GZZ6 450 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PAIP1Q9H074 479 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PPIL3Q9H2H8 161 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRN3Q9H3W5 708 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SAV1Q9H4B6 383 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RPAP3Q9H6T3 665 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RANBP3Q9H6Z4 567 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SMYD3Q9H7B4 428 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NRN1Q9NPD7 142 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PLCB1Q9NQ66 1216 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TRPV5Q9NQA5 729 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 C8orf17Q9NRJ1 99 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 GLRX2Q9NS18 164 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 NDUFB11Q9NX14 153 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PLEK2Q9NYT0 353 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TUBGCP4Q9UGJ1 667 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC7A8Q9UHI5 535 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 GLS2Q9UI32 602 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 HOOK1Q9UJC3 728 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SH3BGRL2Q9UJC5 107 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PLAGL1Q9UM63 463 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 RPL26L1Q9UNX3 145 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ERVK-19Q9WJR5 959 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ZFP30Q9Y2G7 519 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR52Q9Y2T5 361 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PRKAB1Q9Y478 270 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 ATP6V0A2Q9Y487 856 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 COL4A3BPQ9Y5P4 624 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 F11RQ9Y624 299 aaKnown RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC22A7Q9Y694 548 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MTCH2Q9Y6C9 303 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 V9GY05 133 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 FREM1Q5H8C1 2179 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SLIT2O94813 1529 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LTBP2Q14767 1821 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 AKAP9Q99996 3911 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MTORP42345 2549 aa-0.6□□□□□ -2.5
TRAJ28-201ENST00000390509 GRIN2DO15399 1336 aa-0.6□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF644Q9H582 1327 aaPredicted RBP-0.6□□□□□ -2.5
TRAJ28-201ENST00000390509 USP42Q9H9J4 1324 aaKnown RBP-0.6□□□□□ -2.5
TRAJ28-201ENST00000390509 SCN1AP35498 2009 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 PTPRKQ15262 1439 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 LOC110117498A0A087WWA1 95 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A087WX48 190 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A1B0GVG6 124 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM230AA0A1W2PPH8 454 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 TSPAN11A1L157 253 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 GMNCA6NCL1 334 aa-0.6□□□□□ -2.51
TRAJ28-201ENST00000390509 OR2T8A6NH00 312 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms