RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MAGEB1P43366 347 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 MFSD13AQ14CX5 517 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 ZNF765Q7L2R6 523 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 SSX9Q7RTT3 188 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 TRAPPC6BQ86SZ2 158 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 OR4D9Q8NGE8 314 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 FAM3DQ96BQ1 224 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 MS4A6EQ96DS6 147 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
RTF1-201ENST00000389629 CNRIP1Q96F85 164 aaPredicted RBP13.12□□□□□ -0.31
RTF1-201ENST00000389629 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 CYB5R1Q9UHQ9 305 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 GPR55Q9Y2T6 319 aaPredicted RBP13.12□□□□□ -0.31
RTF1-201ENST00000389629 PCM1Q15154 2024 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 PVRP15151 417 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 CD80P33681 288 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 CLDN6P56747 220 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 NAA40Q86UY6 237 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 GPR137Q96N19 417 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 SORCS2Q96PQ0 1159 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 RBP7Q96R05 134 aa13.12□□□□□ -0.31
RTF1-201ENST00000389629 C2orf74A8MZ97 194 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 THEGLP0DJG4 465 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 P2RY2P41231 377 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 MPEG1Q2M385 716 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 OR10K2Q6IF99 312 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 EID2Q8N6I1 236 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 OR4K17Q8NGC6 315 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 OR4C16Q8NGL9 310 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 ZFYVE21Q9BQ24 234 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 MEGF11A6BM72 1044 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 P2RX1P51575 399 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 GNMTQ14749 295 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
RTF1-201ENST00000389629 COX15Q7KZN9 410 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 OR11H4Q8NGC9 324 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 COPS7AQ9UBW8 275 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 ZMAT5Q9UDW3 170 aaKnown RBP13.11□□□□□ -0.31
RTF1-201ENST00000389629 PLEKHM1Q9Y4G2 1056 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 RHPN2P1A8MT19 583 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 TNFSF12O43508 249 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 RDH16O75452 317 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 SPI1P17947 270 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 EPHA4P54764 986 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 CAMK2DQ13557 499 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 GPR18Q14330 331 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 LIPNQ5VXI9 398 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 P4HA3Q7Z4N8 544 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 OR52H1Q8NGJ2 320 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 URM1Q9BTM9 101 aaKnown RBP13.11□□□□□ -0.31
RTF1-201ENST00000389629 SPHK1Q9NYA1 384 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
RTF1-201ENST00000389629 SNRPGP15A8MWD9 76 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 BDH1Q02338 343 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 GUCA2AQ02747 115 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 CDK5R1Q15078 307 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 GLYATL3Q5SZD4 288 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 OTPQ5XKR4 325 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 SLC16A13Q7RTY0 426 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 SMIM19Q96E16 107 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 NTMQ9P121 344 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 SCML1Q9UN30 329 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 CYP8B1Q9UNU6 501 aa13.11□□□□□ -0.31
RTF1-201ENST00000389629 ZNF98A6NK75 572 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SLC16A7O60669 478 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 HIST1H1CP16403 213 aaKnown RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 TRHRP34981 398 aaPredicted RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 GPNMBQ14956 572 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 ZNF542PQ5EBM4 170 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 ZNF283Q8N7M2 679 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 OR5T3Q8NGG3 340 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 NRTNQ99748 197 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 GAREM1Q9H706 876 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 STEAP1Q9UHE8 339 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 LSM2Q9Y333 95 aaKnown RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 B3GALT1Q9Y5Z6 326 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 ZNF850A8MQ14 1090 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 TRIM77I1YAP6 450 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 CAV2P51636 162 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 NDUFA6P56556 154 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 ALKBH1Q13686 389 aaKnown RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 SSX2Q16385 188 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 MFSD9Q8NBP5 474 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 Q96M85 177 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 NKX3-1Q99801 234 aaPredicted RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 OR52A5Q9H2C5 316 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 CKAP5Q14008 2032 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 NPIPB8E9PQR5 432 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 GPR31O00270 319 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 CNR1P21554 472 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 RAB5CP51148 216 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 METAP1P53582 386 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 SNRPEP62304 92 aaKnown RBP13.1□□□□□ -0.31
RTF1-201ENST00000389629 CDKN3Q16667 212 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 PLA1AQ53H76 456 aa13.1□□□□□ -0.31
RTF1-201ENST00000389629 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms