RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 MST1RQ04912 1400 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 CDC14BO60729 498 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 RAB5CP51148 216 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 RHEBL1Q8TAI7 183 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 FIBINQ8TAL6 211 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ASIC5Q9NY37 505 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 TREM2Q9NZC2 230 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 DBX1A6NMT0 343 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 KLK10O43240 276 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 KCNK2O95069 426 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 RNASE1P07998 156 aaKnown RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 RRASP10301 218 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 IAPPP10997 89 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 CA5AP35218 305 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 CLLU1OSQ5K130 101 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 GFRALQ6UXV0 394 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 NAT6Q93015 286 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 CMTM3Q96MX0 182 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 FOXE1O00358 373 aaPredicted RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 UBCP0CG48 685 aaKnown RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 CTSCP53634 463 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 RHOBP62745 196 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ZNF789Q5FWF6 425 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 OR2G6Q5TZ20 316 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 LYPD4Q6UWN0 246 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 GPR26Q8NDV2 337 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ROBO4Q8WZ75 1007 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 C5orf49A4QMS7 147 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 CYR61O00622 381 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 OR7C2O60412 319 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 TNFSF15O95150 251 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 SNHG28P0DPA3 235 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 PPIAP62937 165 aaKnown RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 PLXDC2Q6UX71 529 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ZNF317Q96PQ6 595 aaPredicted RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 NMNAT3Q96T66 252 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 SULT1C2O00338 296 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 SPRY3O43610 288 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 GNG10P50151 68 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ASCL1P50553 236 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 KCNJ8Q15842 424 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 GLYR1Q49A26 553 aaPredicted RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 PM20D2Q8IYS1 436 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 FAM109AQ8N4B1 249 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 NPWQ8N729 165 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 FUBP1Q96AE4 644 aaKnown RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 ABHD6Q9BV23 337 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ZNF331Q9NQX6 463 aaPredicted RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 OSGIN1Q9UJX0 560 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 PADI1Q9ULC6 663 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 AUP1Q9Y679 476 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 CCSO14618 274 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 UTS2O95399 124 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 RAP2BP61225 183 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 GPR176Q14439 515 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ZNF169Q14929 603 aaPredicted RBP11.51□□□□□ -0.57
CHD3-203ENST00000380358 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 SLC23A1Q9UHI7 598 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 Q9Y3F1 56 aa11.51□□□□□ -0.57
CHD3-203ENST00000380358 GAPDHSO14556 408 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 ZNF264O43296 627 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 CPT2P23786 658 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 HOXD12P35452 270 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 PDZD3Q86UT5 571 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 OR10J5Q8NHC4 309 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 PGAP3Q96FM1 320 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 ZNF71Q9NQZ8 489 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 ENPP4Q9Y6X5 453 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 DIP2CQ9Y2E4 1556 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 TMEM235A6NFC5 223 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 CBY3A6NI87 242 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 CPEP16870 476 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 MFGE8Q08431 387 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 RNFT1Q5M7Z0 435 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 NCCRP1Q6ZVX7 275 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 C11orf40Q8WZ69 217 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 SLC35E1Q96K37 410 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 PIGQQ9BRB3 760 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 C1orf123Q9NWV4 160 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 RBP4P02753 201 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 AMTP48728 403 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 ZNF280AP59817 542 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 HBG1P69891 147 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 HBG2P69892 147 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 ZNF385BQ569K4 471 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 TMEM182Q6ZP80 229 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 HSD17B13Q7Z5P4 300 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 OR6T1Q8NGN1 323 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 SFT2D1Q8WV19 159 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 LRFN3Q9BTN0 628 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 MCOLN1Q9GZU1 580 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 PELI2Q9HAT8 420 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 ACKR3P25106 362 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 SELENOWP63302 87 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 TGIF2LYQ8IUE0 185 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 TGIF2LXQ8IUE1 241 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms