RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 WNT1P04628 370 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 ABCD3P28288 659 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 PSPHP78330 225 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 RPL18Q07020 188 aaKnown RBP12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 ACKR1Q16570 336 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC25A25Q6KCM7 469 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 DHRS13Q6UX07 377 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 BOLLQ8N9W6 283 aaKnown RBP12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 ABHD4Q8TB40 342 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 SPTSSAQ969W0 71 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 OSGIN1Q9UJX0 560 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 MGAT4AQ9UM21 535 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 TMEM129A0AVI4 362 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 DPM1O60762 260 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 DNAJB6O75190 326 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 PIPP12273 146 aaPredicted RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 IFNGR1P15260 489 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 APOBEC1P41238 236 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 CBX5P45973 191 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 MRPL49Q13405 166 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 PRTGQ2VWP7 1150 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 CARFQ8N187 725 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC43A2Q8N370 569 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 TMEM52Q8NDY8 209 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 CCDC107Q8WV48 283 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 ANKRD9Q96BM1 317 aaPredicted RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 SYNPO2LQ9H987 977 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 ARHGEF17Q96PE2 2063 aaPredicted RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 ZFC3H1O60293 1989 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 DNASE1P24855 282 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 DLSTP36957 453 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 RPS27P42677 84 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 GZMMP51124 257 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 HCCSP53701 268 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 UBE2NP61088 152 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 AAED1Q7RTV5 226 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 BRIX1Q8TDN6 353 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 ASB17Q8WXJ9 295 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 TMEM106AQ96A25 262 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 TWSG1Q9GZX9 223 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 WDR76Q9H967 626 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC25A19Q9HC21 320 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 FANCFQ9NPI8 374 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 SHISA7A6NL88 538 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 MTRF1O75570 445 aaKnown RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 STOMP27105 288 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 PRKCDQ05655 676 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 PYHIN1Q6K0P9 492 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 C3orf33Q6P1S2 294 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 RFPL4BQ6ZWI9 263 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 SIMC1Q8NDZ2 872 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 PDCD1LG2Q9BQ51 273 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC19A3Q9BZV2 496 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 IL20Q9NYY1 176 aa12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 VSX1Q9NZR4 365 aaPredicted RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 RABL2AQ9UBK7 228 aaPredicted RBP12.95□□□□□ -0.34
SHROOM1-203ENST00000378679 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 HRKO00198 91 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 TMEM225BP0DP42 221 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 CD79AP11912 226 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 ERP29P30040 261 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 PITPNBP48739 271 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 TEKQ02763 1124 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 PXDC1Q5TGL8 231 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 SFRP4Q6FHJ7 346 aaPredicted RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 NIPAL3Q6P499 406 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 YRDCQ86U90 279 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 ELP5Q8TE02 316 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 SMAP2Q8WU79 429 aaPredicted RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 C1orf198Q9H425 327 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 PCDHB16Q9NRJ7 776 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 NUDT15Q9NV35 164 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 MAGEB4O15481 346 aaPredicted RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 DOK2O60496 412 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 MRPL33O75394 65 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 STK17BO94768 372 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 IFNA7P01567 189 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 APEX1P27695 318 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 RPL27P61353 136 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 HYAL4Q2M3T9 481 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 RHBDD2Q6NTF9 364 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 ZNF584Q8IVC4 421 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 OR4D9Q8NGE8 314 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 PIGQQ9BRB3 760 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 C20orf141Q9NUB4 165 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 ZNF69Q9UC07 566 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 MLXQ9UH92 298 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 M0R233 179 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 RBMXL2O75526 392 aaKnown RBP12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 TNFSF15O95150 251 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 RRADP55042 308 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 SPOCK1Q08629 439 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 IL11RAQ14626 422 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 SMCO1Q147U7 214 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 TMEM201Q5SNT2 666 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 OVCH1Q7RTY7 1134 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 ARIH2OSQ8N7S6 290 aa12.94□□□□□ -0.34
SHROOM1-203ENST00000378679 SLC25A43Q8WUT9 341 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms