RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PIWIL3Q7Z3Z3 882 aaKnown RBP12.76□□□□□ -0.37
HDAC6-204ENST00000376643 LINC01356Q8N9X3 169 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 OR5J2Q8NH18 312 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 DYDC1Q8WWB3 177 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 RASSF5Q8WWW0 418 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 MRPL24Q96A35 216 aaKnown RBP12.76□□□□□ -0.37
HDAC6-204ENST00000376643 FOXB1Q99853 325 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 C1orf198Q9H425 327 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 VAPAQ9P0L0 249 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 SLC7A8Q9UHI5 535 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 LEF1Q9UJU2 399 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF346Q9UL40 294 aaKnown RBP12.76□□□□□ -0.37
HDAC6-204ENST00000376643 TRIM33Q9UPN9 1127 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 MS4A18H0YCH9 400 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 CHP2O43745 196 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 MGRN1O60291 552 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 BGLAPP02818 100 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 CELA3BP08861 270 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 IDH3AP50213 366 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 CYP51A1Q16850 503 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 MS4A18Q3C1V0 323 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 MMEL1Q495T6 779 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 AGKQ53H12 422 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 INTS11Q5TA45 600 aaKnown RBP12.75□□□□□ -0.37
HDAC6-204ENST00000376643 CARD17Q5XLA6 110 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 KRT80Q6KB66 452 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 HDDC2Q7Z4H3 204 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 RFLNBQ8N5W9 214 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 TEX29Q8N6K0 151 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 MPP4Q96JB8 637 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 SLC19A3Q9BZV2 496 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 MRGBPQ9NV56 204 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 SEC14L4Q9UDX3 406 aa12.75□□□□□ -0.37
HDAC6-204ENST00000376643 TRBV5-3A0A0A0MS03 114 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 PLPP3O14495 311 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 ANGPT2O15123 496 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 PTHP01270 115 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 HLA-HP01893 362 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 ADRA2AP08913 450 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 ADORA3P0DMS8 318 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 CBLP22681 906 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 SRP14P37108 136 aaKnown RBP12.74□□□□□ -0.37
HDAC6-204ENST00000376643 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
HDAC6-204ENST00000376643 AQP5P55064 265 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 CDH12P55289 794 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 MRPS11P82912 194 aaKnown RBP12.74□□□□□ -0.37
HDAC6-204ENST00000376643 CAMK2DQ13557 499 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 CR1LQ2VPA4 569 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 BEND6Q5SZJ8 279 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-204ENST00000376643 TTC33Q6PID6 262 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-204ENST00000376643 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 PATL1Q86TB9 770 aaKnown RBP12.74□□□□□ -0.37
HDAC6-204ENST00000376643 FUNDC1Q8IVP5 155 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 MSRB3Q8IXL7 192 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 OR6X1Q8NH79 312 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 TSPEARQ8WU66 669 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 ZBTB9Q96C00 473 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 MCHR1Q99705 422 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 SEC61A2Q9H9S3 476 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 MED29Q9NX70 200 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 B3GNT2Q9NY97 397 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 STX18Q9P2W9 335 aaKnown RBP12.74□□□□□ -0.37
HDAC6-204ENST00000376643 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
HDAC6-204ENST00000376643 SH3PXD2BA1X283 911 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 B4DSR2 109 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 TPST1O60507 370 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 MFN2O95140 757 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 OR8G3PP0DMU2 310 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 B4GALT1P15291 398 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-204ENST00000376643 AQP1P29972 269 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 DVL1P1P54792 670 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-204ENST00000376643 RAB1AP62820 205 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 MOGQ16653 247 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 NRN1LQ496H8 165 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 PAGE3Q5JUK9 113 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 DHDDSQ86SQ9 333 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 CDK20Q8IZL9 346 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 ARIH2OSQ8N7S6 290 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 SLC26A7Q8TE54 656 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF566Q969W8 418 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF837Q96EG3 531 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-204ENST00000376643 CPPED1Q9BRF8 314 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-204ENST00000376643 SIKE1Q9BRV8 207 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF416Q9BWM5 594 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 LRMDAQ9H2I8 198 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF385DQ9H6B1 395 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 SLCO1B3Q9NPD5 702 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 NANSQ9NR45 359 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 SLAMF8Q9P0V8 285 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 TMEFF2Q9UIK5 374 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-204ENST00000376643 NDUFAF1Q9Y375 327 aa12.73□□□□□ -0.37
HDAC6-204ENST00000376643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.379e-8■■■□□ 18
HDAC6-204ENST00000376643 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
HDAC6-204ENST00000376643 ANK3Q12955 4377 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms