RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PSMB10P40306 273 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 TAS2R20P59543 309 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 SIRPAP78324 504 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 MICBQ29980 383 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 MANEAQ5SRI9 462 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 C11orf88Q6PI97 169 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 TMEFF1Q8IYR6 380 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 RAB42Q8N4Z0 105 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 OR1M1Q8NGA1 313 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 SFXN5Q8TD22 340 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 MS4A6EQ96DS6 147 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 ZNF75AQ96N20 296 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 FBRSQ9HAH7 460 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 TMEM265A0A087WTH1 108 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 RAB19A4D1S5 217 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 A6NCN8 305 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 LRRC72A6NJI9 287 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 RFPL4AA6NLU0 287 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 RFPL4AL1F8VTS6 287 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 PVRP15151 417 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 EDNRAP25101 427 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 GPR18Q14330 331 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 RBMS2Q15434 407 aaKnown RBP11.79□□□□□ -0.52
MSH5-204ENST00000375755 UNQ9370/PRO34162Q6UXP9 181 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 OR4C16Q8NGL9 310 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 CHST6Q9GZX3 395 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 WSB2Q9NYS7 404 aaPredicted RBP11.79□□□□□ -0.52
MSH5-204ENST00000375755 CENPVL1A0A0U1RR11 272 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 TMEM218A2RU14 115 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 SYNDIG1LA6NDD5 238 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ANKRD61A6NGH8 418 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 SPP1P10451 314 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 MC3RP41968 323 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 LUMP51884 338 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 OR2W3Q7Z3T1 314 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 OR56A1Q8NGH5 318 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 FLVCR1-AS1Q8TAF5 88 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 NANPQ8TBE9 248 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 DOK4Q8TEW6 326 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZMYND19Q96E35 227 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 TINAGL1Q9GZM7 467 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 SRMSQ9H3Y6 488 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 PRDM7Q9NQW5 492 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZNF230Q9UIE0 474 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 EDARQ9UNE0 448 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZNF443Q9Y2A4 671 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 SLC35A3Q9Y2D2 325 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 OR10H1Q9Y4A9 318 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 TRAV27A0A087WT01 109 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 A0A1W2PR48 441 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 OR6C68A6NDL8 312 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 RIIAD1A6NNX1 92 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 H0YC42 278 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 EIF3GO75821 320 aaKnown RBP eCLIP11.78□□□□□ -0.52
MSH5-204ENST00000375755 ACAA1P09110 424 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 LSSP48449 732 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZNF136P52737 540 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ACTC1P68032 377 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ACTA1P68133 377 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 SMAD2Q15796 467 aaKnown RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZIC1Q15915 447 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 CCDC157Q569K6 752 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZFP82Q8N141 532 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 HAVCR1Q96D42 359 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 TMEM185BQ9H7F4 350 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 KIR3DX1Q9H7L2 352 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZNF879B4DU55 563 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 CTSVO60911 334 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 PPP1R3DO95685 299 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 NAA10P41227 235 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 PPIAP62937 165 aaKnown RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 MRPS10P82664 201 aaKnown RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 PLA2G7Q13093 441 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 MPPED2Q15777 294 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 PCGF3Q3KNV8 242 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ZNF836Q6ZNA1 936 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 VN1R4Q7Z5H5 301 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 SVBPQ8N300 66 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 C12orf45Q8N5I9 185 aaPredicted RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 ACOT4Q8N9L9 421 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 NUP43Q8NFH3 380 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 OR51L1Q8NGJ5 315 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 OR1S2Q8NGQ3 325 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 OR14A16Q8NHC5 309 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 ARSGQ96EG1 525 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 FAM117AQ9C073 453 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 IL21RQ9HBE5 538 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 USP36Q9P275 1121 aaKnown RBP11.78□□□□□ -0.52
MSH5-204ENST00000375755 GNG8Q9UK08 70 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 COLEC10Q9Y6Z7 277 aa11.78□□□□□ -0.52
MSH5-204ENST00000375755 TRBV23-1A0A0A0MS06 115 aa11.77□□□□□ -0.53
MSH5-204ENST00000375755 P2RX6O15547 441 aa11.77□□□□□ -0.53
MSH5-204ENST00000375755 CLEC3AO75596 197 aa11.77□□□□□ -0.53
MSH5-204ENST00000375755 APBB3O95704 486 aa11.77□□□□□ -0.53
MSH5-204ENST00000375755 CTSBP07858 339 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms