RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 SLC25A28Q96A46 364 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 UTP23Q9BRU9 249 aaKnown RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 DAPP1Q9UN19 280 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 SDK1Q7Z5N4 2213 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 GRXCR1A8MXD5 290 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 DISC1C4P0D8 188 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 CTNSO60931 367 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 RASGRP1O95267 797 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 ADH1CP00326 375 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 ANXA2P07355 339 aaKnown RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 PVALBP20472 110 aaPredicted RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 TLX1P31314 330 aaPredicted RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 DRD3P35462 400 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 FBXO42Q6P3S6 717 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 OR51D1Q8NGF3 324 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 OR51A4Q8NGJ6 313 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 LCN9Q8WX39 176 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 RNF166Q96A37 237 aaPredicted RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 TEX101Q9BY14 249 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 EXO5Q9H790 373 aa12.5□□□□□ -0.41
USP49-201ENST00000373006 MRPS2Q9Y399 296 aaKnown RBP12.5□□□□□ -0.41
USP49-201ENST00000373006 TMEM200CA6NKL6 621 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 CDC123O75794 336 aaPredicted RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 EML2O95834 649 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 CD3DP04234 171 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 SLC35G6P0C7Q6 338 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 MEOX2P50222 304 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 TMED4Q7Z7H5 227 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 SLC35F3Q8IY50 421 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 CDRT4Q8N9R6 151 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 OR5AK2Q8NH90 309 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 PAWRQ96IZ0 340 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 PELOQ9BRX2 385 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 SLITRK2Q9H156 845 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 FRRS1LQ9P0K9 344 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 SLC27A6Q9Y2P4 619 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 KLHDC2Q9Y2U9 406 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 C1QTNF3-AMACRE9PGA6 284 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 BRINP1O60477 761 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 CALCBP10092 127 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 MPGP29372 298 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 ACAA2P42765 397 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 MRPS10P82664 201 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 FLI1Q01543 452 aaPredicted RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 FAM53BQ14153 422 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 FHL5Q5TD97 284 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 LIPNQ5VXI9 398 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 KIRREL2Q6UWL6 708 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 RBMS3Q6XE24 437 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 USP53Q70EK8 1073 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 ZNF546Q86UE3 836 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 RAB11FIP5Q9BXF6 653 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 BCL2L14Q9BZR8 327 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 ENTPD2Q9Y5L3 495 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 BLOC1S5-TXNDC5H3BN57 136 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 H7C417 338 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 B3GALT2O43825 422 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 CTSVO60911 334 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 FAUP35544 74 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 MECP2P51608 486 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 SRSF5Q13243 272 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 Q499Y3 187 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 ETFBKMTQ8IXQ9 262 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 CPNE2Q96FN4 548 aaPredicted RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 ADAD1Q96M93 576 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 WDR13Q9H1Z4 485 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 TMEM185BQ9H7F4 350 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 SRA1Q9HD15 236 aaKnown RBP12.49□□□□□ -0.41
USP49-201ENST00000373006 DUSP22Q9NRW4 184 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 MTFP1Q9UDX5 166 aa12.49□□□□□ -0.41
USP49-201ENST00000373006 RAD1O60671 282 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 WDPCPO95876 746 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 CEACAM5P06731 702 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 FABP1P07148 127 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 GGTLC2Q14390 218 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 NNATQ16517 81 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 LEG1Q6P5S2 330 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 RD3Q7Z3Z2 195 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 BPIFCQ8NFQ6 507 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 OR6K3Q8NGY3 331 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 PHYHIPQ92561 330 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 NKX6-2Q9C056 277 aaPredicted RBP12.48□□□□□ -0.41
USP49-201ENST00000373006 IKZF2Q9UKS7 526 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 TVP23AA6NH52 213 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 TXNL1O43396 289 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 PRAMEF2O60811 474 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 APOC1P02654 83 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 CTNNB1P35222 781 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 STARP49675 285 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 GAS6Q14393 721 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 HFEQ30201 348 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 MRPL43Q8N983 215 aaKnown RBP12.48□□□□□ -0.41
USP49-201ENST00000373006 FGF13Q92913 245 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 TMEM106AQ96A25 262 aa12.48□□□□□ -0.41
USP49-201ENST00000373006 SPSB2Q99619 263 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms