RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 UCK1Q9HA47 277 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR12D1P0DN82 309 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 SLX4IPQ5VYV7 408 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 PLAG1Q6DJT9 500 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 TRAPPC6BQ86SZ2 158 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 TMEM135Q86UB9 458 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 NECAP1Q8NC96 275 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 PSMF1Q92530 271 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 ALG8Q9BVK2 526 aa13.05□□□□□ -0.32
RAPGEF1-202ENST00000372190 DTYMKP23919 212 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SLC6A12P48065 614 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SRPXP78539 464 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 ZNF252P-AS1Q0IIN9 211 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 TBCEQ15813 527 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 MDGA1Q8NFP4 955 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR2M7Q8NG81 312 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 NRG4Q8WWG1 115 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 ARRDC3Q96B67 414 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 MYADMQ96S97 322 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 OMGP23515 440 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 HLA-DMAP28067 261 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 CD68P34810 354 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 ADARB1P78563 741 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 DHRS13Q6UX07 377 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 MAMDC2Q7Z304 686 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 HSD17B11Q8NBQ5 300 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 HUS1BQ8NHY5 278 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 DOK4Q8TEW6 326 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 POM121Q96HA1 1249 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 FOXN4Q96NZ1 517 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 STARD5Q9NSY2 213 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 OSGIN1Q9UJX0 560 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 C11orf98E9PRG8 122 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 GABRB3P28472 473 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SOX3P41225 446 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 IL20RBQ6UXL0 311 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 CELF2-AS1Q8N7Q2 184 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SFT2D1Q8WV19 159 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 PHYHIPLQ96FC7 376 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SLC22A12Q96S37 553 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 ATG101Q9BSB4 218 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 CYB5R1Q9UHQ9 305 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 PPP1R3CQ9UQK1 317 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 V9GY05 133 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 CDHR4A6H8M9 788 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 RNF144AP50876 292 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 FAM180BQ6P0A1 224 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 PRSS42Q7Z5A4 293 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR2T4Q8NH00 348 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 L3HYPDHQ96EM0 354 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SFXN2Q96NB2 322 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 RASD1Q9Y272 281 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 STRAPQ9Y3F4 350 aaKnown RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 C2CD4DB7Z1M9 353 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SMIM6P0DI80 62 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 PPP2CBP62714 309 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 RBPJQ06330 500 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 CLPPQ16740 277 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SPRED3Q2MJR0 410 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 OPN5Q6U736 354 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 SLC6A18Q96N87 628 aa13.04□□□□□ -0.32
RAPGEF1-202ENST00000372190 TRAV34A0A0B4J273 112 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 QDPRP09417 244 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 H2AFB1P0C5Y9 115 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 RCAN2Q14206 197 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 ZNF704Q6ZNC4 412 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 BPHLQ86WA6 291 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 SLC35F2Q8IXU6 374 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 ZFPM2Q8WW38 1151 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 TVP23CQ96ET8 276 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 GPR173Q9NS66 373 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 MTCH1Q9NZJ7 389 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 A6NIZ1 184 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 ZNF888P0CJ79 500 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 OSMP13725 252 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 RAP1BP61224 184 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 RACK1P63244 317 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 SHEQ5VZ18 495 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 Q6ZN92 141 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 SERPINA11Q86U17 422 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 SEC22AQ96IW7 307 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 DPH2Q9BQC3 489 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 IL17CQ9P0M4 197 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 TAAR5O14804 337 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 HSBP1O75506 76 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 CNR2P34972 360 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 P2RX3P56373 397 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 SNRPEP62304 92 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 SERTAD2Q14140 314 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 ACOT6Q3I5F7 207 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 TMPPEQ6ZT21 453 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 DTD1Q8TEA8 209 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 HDAC8Q9BY41 377 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms