RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 DAOP14920 347 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 THBS4P35443 961 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 EVX1P49640 407 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 CHN2P52757 468 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 GALK2Q01415 458 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 HGFACQ04756 655 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 ADRM1Q16186 407 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 TRMT5Q32P41 509 aaKnown RBP12.84□□□□□ -0.35
CTSD-202ENST00000367196 RUNDC3AQ59EK9 446 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 INTS11Q5TA45 600 aaKnown RBP12.84□□□□□ -0.35
CTSD-202ENST00000367196 REP15Q6BDI9 236 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 PATL1Q86TB9 770 aaKnown RBP12.84□□□□□ -0.35
CTSD-202ENST00000367196 SVOPLQ8N434 492 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 TSPEARQ8WU66 669 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 CKAP2Q8WWK9 683 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 RASSF5Q8WWW0 418 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 FOXN4Q96NZ1 517 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 MCHR1Q99705 422 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 BPESC1Q9GZL8 116 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 CHODLQ9H9P2 273 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 SEC61A2Q9H9S3 476 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 NOX3Q9HBY0 568 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 MED29Q9NX70 200 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 CUBNO60494 3623 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 MALRD1Q5VYJ5 2156 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 HMGB1P1B2RPK0 211 aaPredicted RBP12.83□□□□□ -0.36
CTSD-202ENST00000367196 PLPP3O14495 311 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 SEC14L2O76054 403 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 ADORA3P0DMS8 318 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 HLA-DOBP13765 273 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 NR4A1P22736 598 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 IGFBP5P24593 272 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 GIFP27352 417 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 CSNK1A1P48729 337 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 PCBP3P57721 371 aaKnown RBP12.83□□□□□ -0.36
CTSD-202ENST00000367196 KRT80Q6KB66 452 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 TTC33Q6PID6 262 aaPredicted RBP12.83□□□□□ -0.36
CTSD-202ENST00000367196 DLEU7Q6UYE1 221 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 MYPOPQ86VE0 399 aaPredicted RBP12.83□□□□□ -0.36
CTSD-202ENST00000367196 DPP10Q8N608 796 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 SMYD1Q8NB12 490 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 SLC26A7Q8TE54 656 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 HPS1Q92902 700 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 MSI2Q96DH6 328 aaKnown RBP12.83□□□□□ -0.36
CTSD-202ENST00000367196 ZNF837Q96EG3 531 aaPredicted RBP12.83□□□□□ -0.36
CTSD-202ENST00000367196 MPP4Q96JB8 637 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 MOGAT1Q96PD6 335 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 CGREF1Q99674 301 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 DOK1Q99704 481 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 ARHGDIGQ99819 225 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 FOXB1Q99853 325 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 EMC6Q9BV81 110 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 SLC19A3Q9BZV2 496 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 MRGBPQ9NV56 204 aa12.83□□□□□ -0.36
CTSD-202ENST00000367196 FBN1P35555 2871 aaKnown RBP12.83□□□□□ -0.36
CTSD-202ENST00000367196 IGHV4-61A0A0C4DH41 118 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 ZNF503-AS2A6NEH8 195 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 M0R233 179 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 M0R3H8 397 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 SYNGR3O43761 229 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 SERPINI2O75830 405 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 STAMBPO95630 424 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 HLA-HP01893 362 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 B4GALT1P15291 398 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 CAMK2DQ13557 499 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 PHYHD1Q5SRE7 291 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 GKAP1Q5VSY0 366 aaPredicted RBP12.82□□□□□ -0.36
CTSD-202ENST00000367196 PIWIL3Q7Z3Z3 882 aaKnown RBP12.82□□□□□ -0.36
CTSD-202ENST00000367196 PHC2Q8IXK0 858 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 ZNF786Q8N393 782 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 MAGEB18Q96M61 343 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 RSPO3Q9BXY4 272 aaPredicted RBP12.82□□□□□ -0.36
CTSD-202ENST00000367196 MS4A5Q9H3V2 200 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 NANSQ9NR45 359 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 B3GNT2Q9NY97 397 aa12.82□□□□□ -0.36
CTSD-202ENST00000367196 SH3PXD2BA1X283 911 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 TRAPPC13A5PLN9 417 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 CPSF4LA6NMK7 179 aaKnown RBP12.81□□□□□ -0.36
CTSD-202ENST00000367196 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 M0QX08 132 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 RNF13O43567 381 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 TPST2O60704 377 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 FARS2O95363 451 aaKnown RBP12.81□□□□□ -0.36
CTSD-202ENST00000367196 TGFAP01135 160 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 HIST1H2ABP04908 130 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 IFNGR1P15260 489 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 ZNF14P17017 642 aaPredicted RBP12.81□□□□□ -0.36
CTSD-202ENST00000367196 GLRXP35754 106 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 PTDSS1P48651 473 aaKnown RBP12.81□□□□□ -0.36
CTSD-202ENST00000367196 MTPNP58546 118 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 RAB1AP62820 205 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 NFYCQ13952 458 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 TTMPQ5BVD1 217 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 ENTPD8Q5MY95 495 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 LINC00114Q6XXX2 140 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 SLC35D2Q76EJ3 337 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 HIST3H2AQ7L7L0 130 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms