RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 SOWAHBA6NEL2 793 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 EFSO43281 561 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 LBX2Q6XYB7 198 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 CDRT4Q8N9R6 151 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 SLCO5A1Q9H2Y9 848 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 SUSD2Q9UGT4 822 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 C5AR1P21730 350 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 TMEM183BQ1AE95 376 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 SIAH1Q8IUQ4 282 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 ST8SIA2Q92186 375 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 C20orf85Q9H1P6 137 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 HELTA6NFD8 242 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 ITGB8P26012 769 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 ZNF239Q16600 458 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 RAB6CQ53S08 254 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 OR2G3Q8NGZ4 309 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 CHST11Q9NPF2 352 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 HS3ST1O14792 307 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 ECI1P42126 302 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 ENDOGQ14249 297 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 FZD8Q9H461 694 aa16.11■□□□□ 0.17
CACNA1A-201ENST00000360228 HCRTO43612 131 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 SPINT3P49223 89 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 MLF2Q15773 248 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 LPAL2Q16609 132 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 MFSD12Q6NUT3 480 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 RABEPKQ7Z6M1 372 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 CTU1Q7Z7A3 348 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 SLC17A9Q9BYT1 436 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 EMC9Q9Y3B6 208 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 FOXE1O00358 373 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 STC2O76061 302 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 ZNF626Q68DY1 528 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 SLC35D2Q76EJ3 337 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 ZC3HAV1LQ96H79 300 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 HRASLS5Q96KN8 279 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 TRIB1Q96RU8 372 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 TINAGL1Q9GZM7 467 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 MED9Q9NWA0 146 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 TYROBPO43914 113 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 SLC36A2Q495M3 483 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 H3F3CQ6NXT2 135 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 GLIS1Q8NBF1 620 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 SIX2Q9NPC8 291 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 NECAP2Q9NVZ3 263 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 POLEQ07864 2286 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 BLVRBP30043 206 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 IDUAP35475 653 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 ABLIM2Q6H8Q1 611 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 SPINT2O43291 252 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 CD46P15529 392 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 ADAM5Q6NVV9 412 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 PPP1R3BQ86XI6 285 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 UTP4Q969X6 686 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 TCTN2Q96GX1 697 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 C12orf10Q9HB07 376 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 RNASET2O00584 256 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 MEOX1P50221 254 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 NR0B2Q15466 257 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 HAGHQ16775 308 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 OR52R1Q8NGF1 315 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 S1PR3Q99500 378 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 MED18Q9BUE0 208 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 MED20Q9H944 212 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 C1GALT1Q9NS00 363 aa16.1■□□□□ 0.17
CACNA1A-201ENST00000360228 I6L893 689 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 DCTN6O00399 190 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 ZNF691Q5VV52 312 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 ULBP3Q9BZM4 244 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 IFT22Q9H7X7 185 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 CEP290O15078 2479 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 SSSCA1O60232 199 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 SLC43A1O75387 559 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 PDGFAP04085 211 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 Q6ZTK2 550 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 ADAMTS14Q8WXS8 1223 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 MARCH4Q9P2E8 410 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 DBX1A6NMT0 343 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 GATMP50440 423 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 BCL7AQ4VC05 210 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 EMC10Q5UCC4 262 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 ASB13Q8WXK3 278 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 CADP27708 2225 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 ADAM23O75077 832 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 OR1Q1Q15612 314 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 HLA-CQ95604 372 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 RAB6CQ9H0N0 254 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 MAN2B1O00754 1011 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 F13BP05160 661 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 HAPLN1P10915 354 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 ERVPABLB-1P60509 514 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 EXOSC2Q13868 293 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 COMMD1Q8N668 190 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 ZNF593O00488 134 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 GDPD3Q7L5L3 318 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
CACNA1A-201ENST00000360228 DOCK6Q96HP0 2047 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms