RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CBX7O95931 251 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 HTR5AP47898 357 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SRP9P49458 86 aaKnown RBP13.72□□□□□ -0.21
CHD4-201ENST00000357008 LANCL3Q6ZV70 420 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 SLC16A14Q7RTX9 510 aa13.72□□□□□ -0.21
CHD4-201ENST00000357008 IGLV3-10A0A075B6K4 115 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 ZNF93P35789 620 aaPredicted RBP13.71□□□□□ -0.21
CHD4-201ENST00000357008 ZNF511Q8NB15 262 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 RAB39BQ96DA2 213 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 OR11A1Q9GZK7 315 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 ACER3Q9NUN7 267 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 TAAR2Q9P1P5 351 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 MYH4Q9Y623 1939 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 MFSD12Q6NUT3 480 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 DYNC2LI1Q8TCX1 351 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 GABARAPL3Q9BY60 117 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 CORINQ9Y5Q5 1042 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 NPPBP16860 134 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 GDF1P27539 372 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 EPHA4P54764 986 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 CDC20Q12834 499 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 MFAP5Q13361 173 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 OR51B6Q9H340 312 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 NDUFB11Q9NX14 153 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 PPP1R2P9O14990 202 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 ARNTP27540 789 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 SLC6A11P48066 632 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 FOXB2Q5VYV0 432 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 KLHDC9Q8NEP7 349 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 TMEM43Q9BTV4 400 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 ACAD8Q9UKU7 415 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 PPT2Q9UMR5 302 aa13.71□□□□□ -0.21
CHD4-201ENST00000357008 P2RY10O00398 339 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 ADAM12O43184 909 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 TIMP1P01033 207 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 CD63P08962 238 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 CALCBP10092 127 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 TMEM176BQ3YBM2 270 aaPredicted RBP13.71□□□□□ -0.22
CHD4-201ENST00000357008 WDR88Q6ZMY6 472 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 PRSS45Q7RTY3 260 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 SYT9Q86SS6 491 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 A6NL46 340 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 CPEP16870 476 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 TNFSF4P23510 183 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 HCCSP53701 268 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 SLCO4A1Q96BD0 722 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 CTRCQ99895 268 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 P2RY12Q9H244 342 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 EXOSC3Q9NQT5 275 aaKnown RBP13.71□□□□□ -0.22
CHD4-201ENST00000357008 OR52A1Q9UKL2 312 aa13.71□□□□□ -0.22
CHD4-201ENST00000357008 GPX5O75715 221 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 BAK1Q16611 211 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 SHEQ5VZ18 495 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TIGD3Q6B0B8 471 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 LRRC18Q8N456 261 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 OLIG1Q8TAK6 271 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 SLC35E2P0CK97 266 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 CD53P19397 219 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TNFRSF4P43489 277 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 NDUFA6P56556 154 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 ABHD17CQ6PCB6 329 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TMEFF1Q8IYR6 380 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 OR51S1Q8NGJ8 323 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TOE1Q96GM8 510 aaKnown RBP13.7□□□□□ -0.22
CHD4-201ENST00000357008 RNF167Q9H6Y7 350 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 PATZ1Q9HBE1 687 aaKnown RBP13.7□□□□□ -0.22
CHD4-201ENST00000357008 SAGE1Q9NXZ1 904 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 MYOTQ9UBF9 498 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 MED16Q9Y2X0 877 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 HCRTR1O43613 425 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 PMP2P02689 132 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 IHHQ14623 411 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 ADAMTSL4Q6UY14 1074 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 HSD17B11Q8NBQ5 300 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TEAD3Q99594 435 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 POFUT1Q9H488 388 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 KPTNQ9Y664 436 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 NUDT19A8MXV4 375 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 CHRM2P08172 466 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
CHD4-201ENST00000357008 ITGB8P26012 769 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 RNLSQ5VYX0 342 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 ZNF836Q6ZNA1 936 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 C19orf47Q8N9M1 422 aaKnown RBP13.7□□□□□ -0.22
CHD4-201ENST00000357008 LFNGQ8NES3 379 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 SLAMF7Q9NQ25 335 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 TRAPPC2LQ9UL33 140 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 FOLR1P15328 257 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 RACK1P63244 317 aaKnown RBP13.7□□□□□ -0.22
CHD4-201ENST00000357008 CLINT1Q14677 625 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 S100A7AQ86SG5 101 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 OR52H1Q8NGJ2 320 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 OR5D18Q8NGL1 313 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 FGF13Q92913 245 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 FGGYQ96C11 551 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms