RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ZNF587BE7ETH6 402 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 HRO43593 1189 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 OR2T7P0C7T2 308 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 SNRPBP14678 240 aaKnown RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 HSF1Q00613 529 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 SLC22A18ASQ8N1D0 253 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 DNAAF1Q8NEP3 725 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 OR2T27Q8NH04 317 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 IL1F10Q8WWZ1 152 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 AKAP1Q92667 903 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMC6-201ENST00000351948 TMEM184BQ9Y519 407 aaPredicted RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 THAP6Q8TBB0 222 aa12.52□□□□□ -0.4
SMC6-201ENST00000351948 ARL5BQ96KC2 179 aa12.52□□□□□ -0.4
SMC6-201ENST00000351948 BCL2L10Q9HD36 194 aa12.52□□□□□ -0.4
SMC6-201ENST00000351948 MED17Q9NVC6 651 aa12.52□□□□□ -0.4
SMC6-201ENST00000351948 ZNF281Q9Y2X9 895 aa12.52□□□□□ -0.4
SMC6-201ENST00000351948 HTR1FP30939 366 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 HNRNPFP52597 415 aaKnown RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 RPL27P61353 136 aaKnown RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 SLC10A1Q14973 349 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 ZNF620Q6ZNG0 422 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 HINT2Q9BX68 163 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 ZNF346Q9UL40 294 aaKnown RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 A0A1B0GTQ1 180 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 SLC16A6O15403 523 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 LSSP48449 732 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 SOWAHCQ53LP3 525 aaPredicted RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 CMPK2Q5EBM0 449 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 ZNF425Q6IV72 752 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 BPHLQ86WA6 291 aaPredicted RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 OR8H3Q8N146 312 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 ABHD5Q8WTS1 349 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 ROBO4Q8WZ75 1007 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 APH1AQ96BI3 265 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 SPACA9Q96E40 222 aaPredicted RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 TEAD3Q99594 435 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 ANKRD19PQ9H560 264 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 SPEF1Q9Y4P9 236 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 FRG2CA6NGY1 282 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 TNFSF11O14788 317 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 PNLIPRP2P54317 469 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 DMRTC1Q5HYR2 192 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 RPL22L1Q6P5R6 122 aaKnown RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 TRILQ7L0X0 811 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 CAMKMTQ7Z624 323 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 LRRC56Q8IYG6 542 aaPredicted RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 HMGCLL1Q8TB92 370 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 FBXL4Q9UKA2 621 aa12.52□□□□□ -0.41
SMC6-201ENST00000351948 GPR55Q9Y2T6 319 aaPredicted RBP12.52□□□□□ -0.41
SMC6-201ENST00000351948 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 SCGNO76038 276 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 ATP1B1P05026 303 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 HLA-DMAP28067 261 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 ADARB1P78563 741 aaKnown RBP12.51□□□□□ -0.41
SMC6-201ENST00000351948 CTU2Q2VPK5 515 aaKnown RBP12.51□□□□□ -0.41
SMC6-201ENST00000351948 ASB17Q8WXJ9 295 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 MBOAT4Q96T53 435 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 ZNF350Q9GZX5 532 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 HSPB11Q9Y547 144 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 RBBP6Q7Z6E9 1792 aaKnown RBP12.51□□□□□ -0.41
SMC6-201ENST00000351948 PRAMEF27A3QJZ7 478 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 HRGP04196 525 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 CLDN15P56746 228 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 TMEM99Q8N816 258 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 TRIB1Q96RU8 372 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 ASH2LQ9UBL3 628 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 MOKQ9UQ07 419 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 GPR171O14626 319 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 QDPRP09417 244 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 LSAMPQ13449 338 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 UBE2UQ5VVX9 321 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 GDPGP1Q6ZNW5 385 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 OR4D9Q8NGE8 314 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 OR5H2Q8NGV7 314 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 RHNO1Q9BSD3 238 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 CHST11Q9NPF2 352 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 MEPEQ9NQ76 525 aaPredicted RBP12.51□□□□□ -0.41
SMC6-201ENST00000351948 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 H2AFB2P0C5Z0 115 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 CLEC2LP0C7M8 214 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 FCGR2AP12318 317 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 UQCRC1P31930 480 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 LTBRP36941 435 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 MAB21L1Q13394 359 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 TMEM205Q6UW68 189 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 CFAP77Q6ZQR2 320 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 OR5M9Q8NGP3 310 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 GIMAP5Q96F15 307 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 ZNF385DQ9H6B1 395 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 INPP5EQ9NRR6 644 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 KCNIP3Q9Y2W7 256 aa12.51□□□□□ -0.41
SMC6-201ENST00000351948 KLF13Q9Y2Y9 288 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms