RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 LPOP22079 712 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 PYCR1P32322 319 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 RGRP47804 291 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 RPIAP49247 311 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 DHPSP49366 369 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 SLC7A9P82251 487 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 BDH1Q02338 343 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 EGR3Q06889 387 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 CNTN1Q12860 1018 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 DUSP5Q16690 384 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF674Q2M3X9 581 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ENTPD8Q5MY95 495 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 TBC1D3CQ6IPX1 549 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 C1orf94Q6P1W5 598 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF529Q6P280 563 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ENPP7Q6UWV6 458 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 TBC1D3Q8IZP1 549 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 MORN4Q8NDC4 146 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 SLC30A7Q8NEW0 376 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 AUTS2Q8WXX7 1259 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 NTNG2Q96CW9 530 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 MYEOVQ96EZ4 313 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 TMEM19Q96HH6 336 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 FAM46AQ96IP4 442 aaKnown RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 WDR92Q96MX6 357 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 OR14A2Q96R54 314 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ATG10Q9H0Y0 220 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 KRCC1Q9NPI7 259 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 CBLN4Q9NTU7 201 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 PRODH2Q9UF12 536 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ATG4BQ9Y4P1 393 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ACOT7O00154 380 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 TBX6O95947 436 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 FCGR3AP08637 254 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ANXA5P08758 320 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 CD22P20273 847 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 MPZP25189 248 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 TDGF1P3P51864 188 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 KHDRBS2Q5VWX1 349 aaKnown RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 CD300LDQ6UXZ3 194 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 FRRS1Q6ZNA5 592 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 FAM129CQ86XR2 697 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 UMODL1-AS1Q8N2C9 162 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 BEND2Q8NDZ0 799 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 KLHDC9Q8NEP7 349 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 OR1J2Q8NGS2 313 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 OR6K2Q8NGY2 324 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 OR6N1Q8NGY5 312 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 SKA2Q8WVK7 121 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 PAAF1Q9BRP4 392 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 PARD6GQ9BYG4 376 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-203ENST00000349748 ATG5Q9H1Y0 275 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 SPACA1Q9HBV2 294 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 KPTNQ9Y664 436 aa9.75□□□□□ -0.85
CAPN3-203ENST00000349748 PRAMEF26H0Y7S4 382 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 J3QRE1 110 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 ADAM10O14672 748 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 CRTAPO75718 401 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 SLC16A1P53985 500 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 PNLIPRP1P54315 467 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 TAS2R20P59543 309 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 RBX1P62877 108 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 GUCA2AQ02747 115 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 PRSS53Q2L4Q9 553 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 VWA2Q5GFL6 755 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 VITQ6UXI7 678 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF610Q8N9Z0 462 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF461Q8TAF7 563 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 OR8U9P0C7N5 309 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 LINC00614P0C842 121 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 DGKAP23743 735 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 TMEM115Q12893 351 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF177Q13360 481 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 SLC10A1Q14973 349 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 AKR1C8PQ5T2L2 129 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 DEGS2Q6QHC5 323 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 TMPPEQ6ZT21 453 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 OR8U1Q8NH10 309 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 PIGXQ8TBF5 258 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 RNASE8Q8TDE3 154 aaKnown RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 LCN9Q8WX39 176 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 NEIL2Q969S2 332 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 S100A16Q96FQ6 103 aaKnown RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 NOL4LQ96MY1 436 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 CAMK1GQ96NX5 476 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 CCNL2Q96S94 520 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 GFI1Q99684 422 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 NDC1Q9BTX1 674 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 PARP12Q9H0J9 701 aaKnown RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 TRPV4Q9HBA0 871 aa9.74□□□□□ -0.85
CAPN3-203ENST00000349748 NOP16Q9Y3C1 178 aaKnown RBP9.74□□□□□ -0.85
CAPN3-203ENST00000349748 CCDC187A0A096LP49 1063 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 SMIM35A0A1B0GVV1 85 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 A0A1W2PQ45 241 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 A0A1W2PQY0 241 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 SLC5A10A0PJK1 596 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 MBLAC1A4D2B0 266 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF705GA8MUZ8 300 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF208O43345 1280 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms