RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 TMEM27Q9HBJ8 222 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 POLE3Q9NRF9 147 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 MBD2Q9UBB5 411 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 NCDNQ9UBB6 729 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 GNG8Q9UK08 70 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 SPTY2D1-AS1A0A0U1RR47 76 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 KANTRA0A1W2PQU2 76 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 PRSS44E7EML9 344 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 EIF4E2O60573 245 aaKnown RBP14.49□□□□□ -0.09
HMGA1-202ENST00000347617 ADAM11O75078 769 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 ATG12O94817 140 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 CD8AP01732 235 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 FCER2P06734 321 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 AKAIN1P0CW23 69 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 SLC25A4P12235 298 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 NID1P14543 1247 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 DIO1P49895 249 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 PON3Q15166 354 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 OR7E24Q6IFN5 339 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 OR2L13Q8N349 312 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 BARX1Q9HBU1 254 aaPredicted RBP14.49□□□□□ -0.09
HMGA1-202ENST00000347617 APMAPQ9HDC9 416 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 MRPS30Q9NP92 439 aaKnown RBP14.49□□□□□ -0.09
HMGA1-202ENST00000347617 ANKRD10Q9NXR5 420 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 GPN3Q9UHW5 284 aaPredicted RBP14.49□□□□□ -0.09
HMGA1-202ENST00000347617 CA14Q9ULX7 337 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 CYP8B1Q9UNU6 501 aa14.49□□□□□ -0.09
HMGA1-202ENST00000347617 GXYLT2A0PJZ3 443 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 FAM221BA6H8Z2 402 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 FAM74A7A6NL05 159 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 PIN1P1O15428 100 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 DNAJB6O75190 326 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 SPDEFO95238 335 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 CBX7O95931 251 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 RLN2P04090 185 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 GP1BAP07359 652 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 TACSTD2P09758 323 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 IFI6P09912 130 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 FOSL2P15408 326 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 CFPP27918 469 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 PSMB5P28074 263 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 HTR2AP28223 471 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 CMPK1P30085 196 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 ACTR1BP42025 376 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 BLKP51451 505 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 ACTR1AP61163 376 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 TOMM20Q15388 145 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 ISXQ2M1V0 245 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 FAM74A3Q4VXF1 159 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 C11orf88Q6PI97 169 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 WDR88Q6ZMY6 472 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 DND1Q8IYX4 353 aaKnown RBP14.48□□□□□ -0.09
HMGA1-202ENST00000347617 LRRC25Q8N386 305 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-202ENST00000347617 CADM4Q8NFZ8 388 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 OR2L3Q8NG85 312 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 OR13H1Q8NG92 308 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 SDF2Q99470 211 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 C12orf57Q99622 126 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 KLHL31Q9H511 634 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 TCF7L1Q9HCS4 588 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 C20orf141Q9NUB4 165 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 TRIOBPQ9H2D6 2365 aa14.48□□□□□ -0.09
HMGA1-202ENST00000347617 XIRP2A4UGR9 3374 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 IGHV1OR15-9A0A0B4J2B8 117 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 IGKV1-8A0A0C4DH67 115 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 F8W036 122 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 BCL2L11O43521 198 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 RAD1O60671 282 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 PRKRAO75569 313 aaKnown RBP14.47□□□□□ -0.09
HMGA1-202ENST00000347617 RLN1P04808 185 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 C8orf89P0DMQ9 161 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 PSMD4P55036 377 aaKnown RBP14.47□□□□□ -0.09
HMGA1-202ENST00000347617 TFF2Q03403 129 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 KIR2DS3Q14952 304 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 CSRP2Q16527 193 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 HFEQ30201 348 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 ZCCHC12Q6PEW1 402 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF227Q86WZ6 799 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 MUC20Q8N307 709 aaPredicted RBP14.47□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF433Q8N7K0 673 aaPredicted RBP14.47□□□□□ -0.09
HMGA1-202ENST00000347617 BPIFCQ8NFQ6 507 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 OR1M1Q8NGA1 313 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 OR4C16Q8NGL9 310 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 LCN9Q8WX39 176 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 DMRTA2Q96SC8 542 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 GPR174Q9BXC1 333 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 SLC17A5Q9NRA2 495 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 POT1Q9NUX5 634 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 TP53BP1Q12888 1972 aaPredicted RBP14.47□□□□□ -0.09
HMGA1-202ENST00000347617 KIR2DS5A0A0G2JLQ3 304 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 A0A0G2JNG1 304 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 OR14I1A6ND48 311 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 FAM25EA8MYX2 175 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 KIR2DS3K7RE56 304 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF254O75437 659 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 SIX6O95475 246 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 AK4P27144 223 aaPredicted RBP14.47□□□□□ -0.09
HMGA1-202ENST00000347617 CSF2RBP32927 897 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 BCL6P41182 706 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 RAB13P51153 203 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms