RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TMPRSS9Q7Z410 1059 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MARCH9Q86YJ5 346 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SORCS1Q8WY21 1168 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MBNL1Q9NR56 388 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FAM217BQ9NTX9 383 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 LOC105369274A0A096LPK9 316 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 LOC102723532A0A0G2JNH3 316 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MAP1LC3B2A6NCE7 125 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GABRPO00591 440 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GSTZ1O43708 216 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ALDH1A1P00352 501 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MTNR1BP49286 362 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RAB38P57729 211 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ALKAL2Q6UX46 152 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR4N4Q8N0Y3 316 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FRMD1Q8N878 549 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PTGR2Q8N8N7 351 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR9K2Q8NGE7 335 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MAP1LC3BQ9GZQ8 125 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FBXO44Q9H4M3 255 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM235A6NFC5 223 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 BCL2L11O43521 198 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CA2P00918 260 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TK1P04183 234 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TNFSF8P32971 234 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ACER2Q5QJU3 275 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GPR157Q5UAW9 335 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FAM71F2Q6NXP2 309 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SERINC5Q86VE9 423 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RBM45Q8IUH3 476 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PWWP2AQ96N64 755 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ASIC5Q9NY37 505 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PCTPQ9UKL6 214 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PRAMEF22A3QJZ6 481 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ANKRD30BLA7E2S9 258 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 DOK2O60496 412 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 COX6CP09669 75 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 NPBWR1P48145 328 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF790Q6PG37 636 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SLC16A12Q6ZSM3 486 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SULF2Q8IWU5 870 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR6J1Q8NGC5 347 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MGST2Q99735 147 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 NAGKQ9UJ70 344 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TCF21O43680 179 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SRPX2O60687 465 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TRAPPC6AO75865 159 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR4F21O95013 312 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 HLA-GP17693 338 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RCC1P18754 421 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FABP9Q0Z7S8 132 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 LRRC32Q14392 662 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 EBPQ15125 230 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR4F3Q6IEY1 312 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 RPUSD3Q6P087 351 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 DHRS11Q6UWP2 260 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CD300LDQ6UXZ3 194 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 OR5K2Q8NHB8 316 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 UCN3Q969E3 161 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 GPR174Q9BXC1 333 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FLVCR1Q9Y5Y0 555 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 TRAV39A0A0B4J263 110 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 EMC8O43402 210 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 SCGB1C2P0DMR2 95 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 EPXP11678 715 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 PRDX3P30048 256 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CYB561P49447 251 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 FDX2Q6P4F2 183 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 ABHD15Q6UXT9 468 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CISHQ9NSE2 258 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 MCTS1Q9ULC4 181 aaKnown RBP3.5□□□□□ -1.85
SYNE2-202ENST00000344113 LRFN2Q9ULH4 789 aa3.5□□□□□ -1.85
SYNE2-202ENST00000344113 CLDN9O95484 217 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TNFSF4P23510 183 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FAM3BP58499 235 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PLK5Q496M5 336 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HMGB4Q8WW32 186 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 OR52D1Q9H346 318 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ASB7Q9H672 318 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ADARB2Q9NS39 739 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 IKZF2Q9UKS7 526 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TRBV9A0A0B4J1U6 114 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CATP04040 527 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC6A6P31641 620 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CSKP41240 450 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MPEG1Q2M385 716 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 COA6Q5JTJ3 125 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ENPP6Q6UWR7 440 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 OR10G4Q8NGN3 311 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CMTM2Q8TAZ6 248 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ADAMTS15Q8TE58 950 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SPEF2Q9C093 1822 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC17A5Q9NRA2 495 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SETD1BQ9UPS6 1966 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GABARAPH6UMI1 98 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SORBS2O94875 1100 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SOD2P04179 222 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PDZD3Q86UT5 571 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 C1orf123Q9NWV4 160 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms