RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 NGBQ9NPG2 151 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ATP13A2Q9NQ11 1180 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 TAS2R5Q9NYW4 299 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 YLPM1P49750 1951 aaKnown RBP11.95□□□□□ -0.5
USP47-202ENST00000339865 FABP4P15090 132 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 TPPP2P59282 170 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 VWA2Q5GFL6 755 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 FAM162BQ5T6X4 162 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ZNF534Q76KX8 674 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 DTWD1Q8N5C7 304 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 PNPLA1Q8N8W4 532 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SCCPDHQ8NBX0 429 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 APIPQ96GX9 242 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SLC39A13Q96H72 371 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 S1PR3Q99500 378 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ATF6BQ99941 703 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 A0A1W2PNV4 684 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 A0A1W2PP55 124 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 MEPCEQ7L2J0 689 aaKnown RBP11.95□□□□□ -0.5
USP47-202ENST00000339865 SCARB1Q8WTV0 552 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SCAMP4Q969E2 229 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 RIMS4Q9H426 269 aaPredicted RBP11.95□□□□□ -0.5
USP47-202ENST00000339865 SLC22A11Q9NSA0 550 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 AP5S1Q9NUS5 200 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 TUBAL3A6NHL2 446 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 HTR5AP47898 357 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 CDH26Q8IXH8 852 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 METTL9Q9H1A3 318 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SLC22A7Q9Y694 548 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 A0A1W2PPQ1 181 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 M0QYG6 137 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 NPY4RP50391 375 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 PAFAH1B3Q15102 231 aaKnown RBP11.94□□□□□ -0.5
USP47-202ENST00000339865 LYRM7Q5U5X0 104 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 ZNF620Q6ZNG0 422 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 EMC7Q9NPA0 242 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 HSBP1O75506 76 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 HSD17B1P14061 328 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 NQO2P16083 231 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 OR56B1Q8NGI3 324 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 EXTL1Q92935 676 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 SMOC2Q9H3U7 446 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 PTHP01270 115 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 DCTP40126 519 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 EDDM3BP56851 147 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 TEAD2Q15562 447 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 RELL2Q8NC24 303 aaPredicted RBP11.94□□□□□ -0.5
USP47-202ENST00000339865 ARRDC3Q96B67 414 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 IKZF5Q9H5V7 419 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 ESRP2Q9H6T0 727 aaKnown RBP11.94□□□□□ -0.5
USP47-202ENST00000339865 SCML1Q9UN30 329 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 A0A1B0GTQ1 180 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 POM121BA6NF01 834 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 IGLON5A6NGN9 336 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 PIAS2O75928 621 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 NXPH2O95156 264 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 MAOBP27338 520 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 PXNP49023 591 aaPredicted RBP11.94□□□□□ -0.5
USP47-202ENST00000339865 IGSF11Q5DX21 431 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 FA2HQ7L5A8 372 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 TFAP2CQ92754 450 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 AMDHD1Q96NU7 426 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 RBFOX1Q9NWB1 397 aaKnown RBP11.94□□□□□ -0.5
USP47-202ENST00000339865 BET1LQ9NYM9 111 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 EMC9Q9Y3B6 208 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 TMEM212A6NML5 194 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 HOXD13P35453 343 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 LCN15Q6UWW0 184 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 ETV3LQ6ZN32 361 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 B3GNT8Q7Z7M8 397 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 GPR32P1Q8NGA4 272 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 NKX2-4Q9H2Z4 354 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 SLC6A20Q9NP91 592 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 CEP290O15078 2479 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 USP31Q70CQ4 1352 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 DGAT2L6Q6ZPD8 337 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 PLXDC1Q8IUK5 500 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 FAM3CQ92520 227 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 HRASLS5Q96KN8 279 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 IFT22Q9H7X7 185 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 INSL6Q9Y581 213 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 TULP4Q9NRJ4 1543 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 SLC9B1P1A6NJY1 282 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 SPINT2O43291 252 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 NAT1P18440 290 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 HRH2P25021 359 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 RGNQ15493 299 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 DEFB110Q30KQ9 67 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 DACT2Q5SW24 774 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 SIAH3Q8IW03 269 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 GMLQ99445 158 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 VN1R3Q9BXE9 311 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 SLC12A9Q9BXP2 914 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 MVB12BQ9H7P6 319 aa11.94□□□□□ -0.5
USP47-202ENST00000339865 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 AKR1C3P42330 323 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 C15orf52Q6ZUT6 534 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms