RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 LIPT2A6NK58 231 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 ICAM2P13598 275 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 S100A5P33763 92 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 PSMB10P40306 273 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 CENPAP49450 140 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 ETFDHQ16134 617 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 EEF1A1P5Q5VTE0 462 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 CNTRLQ7Z7A1 2325 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC25A46Q96AG3 418 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 C5orf34Q96MH7 638 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 MOKQ9UQ07 419 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 IL1AP01583 271 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 CDONQ4KMG0 1287 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 PIP4P1Q86T03 277 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 TIGD4Q8IY51 512 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 NEIL3Q8TAT5 605 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 OR5B2Q96R09 309 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 TSPAN10Q9H1Z9 355 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 SH2D2AQ9NP31 389 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 SERINC1Q9NRX5 453 aa20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 ING1Q9UK53 422 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-203ENST00000339162 SPAARA0A1B0GVQ0 90 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 A0A1W2PRG6 482 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 FAM47E-STBD1D6RA91 191 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 PLPP2O43688 288 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 IFNGR1P15260 489 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 TGM1P22735 817 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 POU3F1Q03052 451 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 TCF15Q12870 199 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 ATP1A4Q13733 1029 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 C3orf33Q6P1S2 294 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 ZNF248Q8NDW4 579 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 OR13C5Q8NGS8 318 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 PPIL3Q9H2H8 161 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 MED29Q9NX70 200 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 hCG_2014768A0A024R1R8 64 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 CASKO14936 926 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 RGS5O15539 181 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC16A7O60669 478 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 NCR1O76036 304 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 ACTA2P62736 377 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 ACTG2P63267 376 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 GPR50Q13585 617 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 FAM27D1Q5T7N8 215 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 OR6N2Q8NGY6 317 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC39A7Q92504 469 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 POTEKPQ9BYX7 375 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 CHST11Q9NPF2 352 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 ST6GALNAC2Q9UJ37 374 aa20.15■□□□□ 0.82
PDLIM2-203ENST00000339162 A0A0G2JMM0 328 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 A0A1W2PPB8 328 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 A0A1W2PRS3 328 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 KIR3DP1A8MWS1 328 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 RAD1O60671 282 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 HLA-DQA2P01906 255 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 DPP4P27487 766 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 DNASE1L1P49184 302 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 TMEM176BQ3YBM2 270 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 ACER2Q5QJU3 275 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 STPG1Q5TH74 334 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 SLC16A9Q7RTY1 509 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 DPY19L4Q7Z388 723 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 ARMC10Q8N2F6 343 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 OR6S1Q8NH40 331 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 GHSRQ92847 366 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 TXNDC15Q96J42 360 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 PGLYRP3Q96LB9 341 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 SMURF1Q9HCE7 757 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 IL17BQ9UHF5 180 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 B9D1Q9UPM9 204 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 PEX16Q9Y5Y5 336 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 PRR33A8MZF0 331 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 RGS9O75916 674 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 PSKH1P11801 424 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 CTLA4P16410 223 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 IFITM3Q01628 133 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 CHAF1BQ13112 559 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 MFSD13AQ14CX5 517 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 DMKNQ6E0U4 476 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 OR1J4Q8NGS1 313 aa20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 THOC3Q96J01 351 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 ADAD1Q96M93 576 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 PLEKHB1Q9UF11 243 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-203ENST00000339162 SERPINA7P05543 415 aa20.13■□□□□ 0.81
PDLIM2-203ENST00000339162 RANBP1P43487 201 aa20.13■□□□□ 0.81
PDLIM2-203ENST00000339162 TAS2R43P59537 309 aa20.13■□□□□ 0.81
PDLIM2-203ENST00000339162 SYS1Q8N2H4 156 aa20.13■□□□□ 0.81
PDLIM2-203ENST00000339162 SCAIQ8N9R8 606 aa20.13■□□□□ 0.81
PDLIM2-203ENST00000339162 SMAD5Q99717 465 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-203ENST00000339162 ALKBH4Q9NXW9 302 aa20.13■□□□□ 0.81
PDLIM2-203ENST00000339162 SLC22A23A1A5C7 686 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 NPIPA5E9PKD4 350 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 TERTO14746 1132 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 LIFP15018 202 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 GBX2P52951 348 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 SIRPAP78324 504 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 TMEM81Q6P7N7 255 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 BEST3Q8N1M1 668 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 PSMF1Q92530 271 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms