RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 C4BPBP20851 252 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 CCKBRP32239 447 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 EVI2BP34910 448 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 GPR3P46089 330 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 CCR9P51686 369 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 HSD17B7P56937 341 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 OR10A3P58181 314 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 SNRPNP63162 240 aaKnown RBP9.81□□□□□ -0.84
RTN3-201ENST00000338850 SLC3A1Q07837 685 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 CRYZQ08257 329 aaKnown RBP9.81□□□□□ -0.84
RTN3-201ENST00000338850 SERTAD2Q14140 314 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 TOMM20Q15388 145 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 GSG1Q2KHT4 349 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 SLC25A35Q3KQZ1 300 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 C14orf28Q4W4Y0 310 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 ZBTB37Q5TC79 503 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 LINC01590Q5TEZ4 76 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 ARHGAP40Q5TG30 622 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 FNDC7Q5VTL7 733 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 FIGNL1Q6PIW4 674 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 KIRREL2Q6UWL6 708 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 LRRN1Q6UXK5 716 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 TAF8Q7Z7C8 310 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 LUZP2Q86TE4 346 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 EXD3Q8N9H8 876 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 NPEPL1Q8NDH3 523 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 OR52E2Q8NGJ4 325 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 CCL4L1Q8NHW4 92 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 HSD17B8Q92506 261 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 ZFP64Q9NPA5 681 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 SCP2D1Q9UJQ7 156 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 ZNF281Q9Y2X9 895 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 AHCTF1Q8WYP5 2266 aa9.81□□□□□ -0.84
RTN3-201ENST00000338850 KIF26BQ2KJY2 2108 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 TRBV5-5A0A0J9YX44 114 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 ZC3H12DA2A288 527 aaKnown RBP9.8□□□□□ -0.84
RTN3-201ENST00000338850 IFITM5A6NNB3 132 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 B4DGG1 531 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 CPNE3O75131 537 aaKnown RBP9.8□□□□□ -0.84
RTN3-201ENST00000338850 PEX14O75381 377 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 IL5P05113 134 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 TACSTD2P09758 323 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 H2AFB2P0C5Z0 115 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 PNLIPP16233 465 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 GLB1P16278 677 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 HIST1H1CP16403 213 aaKnown RBP9.8□□□□□ -0.84
RTN3-201ENST00000338850 SPI1P17947 270 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 FUT1P19526 365 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 SSBP1Q04837 148 aaKnown RBP9.8□□□□□ -0.84
RTN3-201ENST00000338850 CLN3Q13286 438 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 EIF3IQ13347 325 aaKnown RBP9.8□□□□□ -0.84
RTN3-201ENST00000338850 EXOSC7Q15024 291 aaKnown RBP9.8□□□□□ -0.84
RTN3-201ENST00000338850 FCN2Q15485 313 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 GPR139Q6DWJ6 353 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 WBP2NLQ6ICG8 309 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 FDX2Q6P4F2 183 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 LYPD4Q6UWN0 246 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 RAB11FIP2Q7L804 512 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 SSX6Q7RTT6 188 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 SLC16A9Q7RTY1 509 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 ZAR1Q86SH2 424 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 GLCCI1Q86VQ1 547 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 SIAH3Q8IW03 269 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 OR6V1Q8N148 313 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 SPICQ8N5J4 248 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 C19orf47Q8N9M1 422 aaKnown RBP9.8□□□□□ -0.84
RTN3-201ENST00000338850 LRRC75AQ8NAA5 344 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 OR51A7Q8NH64 312 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 C3orf49Q96BT1 292 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 TBX5Q99593 518 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 CACNG6Q9BXT2 260 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 STRADBQ9C0K7 418 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 NUDT15Q9NV35 164 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 SLCO1C1Q9NYB5 712 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 HSPB11Q9Y547 144 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 CLDN16Q9Y5I7 305 aa9.8□□□□□ -0.84
RTN3-201ENST00000338850 NPIPA5A0A0B4J1W7 369 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 TRBV2A0A0J9YWF9 115 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 ZNF860A6NHJ4 632 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 LILRA5A6NI73 299 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 SNRPGP15A8MWD9 76 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 MCIDASD6RGH6 385 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 NPIPA7E9PJI5 369 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 K7ENP7 123 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 ZNF593O00488 134 aaPredicted RBP9.79□□□□□ -0.84
RTN3-201ENST00000338850 CLDN4O14493 209 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 FABP7O15540 132 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 NUDT21O43809 227 aaKnown RBP9.79□□□□□ -0.84
RTN3-201ENST00000338850 DNAJB6O75190 326 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 ABHD16AO95870 558 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 IGKV1D-16P01601 117 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 CD14P08571 375 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 MRPL3P09001 348 aaKnown RBP9.79□□□□□ -0.84
RTN3-201ENST00000338850 NPIPA8P0DM63 369 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 M6PRP20645 277 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 DPP4P27487 766 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 HTR2BP41595 481 aa9.79□□□□□ -0.84
RTN3-201ENST00000338850 AP2S1P53680 142 aaPredicted RBP9.79□□□□□ -0.84
RTN3-201ENST00000338850 SLC16A1P53985 500 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms