RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KLHL17Q6TDP4 642 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 TUBA1AQ71U36 451 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 PGAM4Q8N0Y7 254 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 GPR137CQ8N3F9 429 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 FITM2Q8N6M3 262 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 SGTBQ96EQ0 304 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 HS6ST2Q96MM7 605 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 OBP2BQ9NPH6 170 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 ZNF701Q9NV72 531 aaPredicted RBP13.32□□□□□ -0.28
PRKN-201ENST00000338468 CISD1Q9NZ45 108 aaKnown RBP13.32□□□□□ -0.28
PRKN-201ENST00000338468 ADA2Q9NZK5 511 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 RHCGQ9UBD6 479 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 CD300AQ9UGN4 299 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 USF3Q68DE3 2245 aa13.32□□□□□ -0.28
PRKN-201ENST00000338468 E7EQL1 145 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 OVOL3O00110 214 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 OR6A2O95222 327 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 CD8AP01732 235 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 HSD17B1P14061 328 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 PTH2RP49190 550 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 CDH11P55287 796 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 BIDP55957 195 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 RPL18Q07020 188 aaKnown RBP13.31□□□□□ -0.28
PRKN-201ENST00000338468 GLYATQ6IB77 296 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 SLC35D2Q76EJ3 337 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 NANOGNBQ7Z5D8 188 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 FAM86B1Q8N7N1 296 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 OR6X1Q8NH79 312 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 SMAP2Q8WU79 429 aaPredicted RBP13.31□□□□□ -0.28
PRKN-201ENST00000338468 TMEM54Q969K7 222 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 PERPQ96FX8 193 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 REPIN1Q9BWE0 567 aaKnown RBP13.31□□□□□ -0.28
PRKN-201ENST00000338468 GSX2Q9BZM3 304 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 DCAF13Q9NV06 445 aaKnown RBP13.31□□□□□ -0.28
PRKN-201ENST00000338468 CRNNQ9UBG3 495 aaPredicted RBP13.31□□□□□ -0.28
PRKN-201ENST00000338468 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 LAMP3Q9UQV4 416 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 MED31Q9Y3C7 131 aa13.31□□□□□ -0.28
PRKN-201ENST00000338468 MAGED1Q9Y5V3 778 aaPredicted RBP13.31□□□□□ -0.28
PRKN-201ENST00000338468 IGHV1-18A0A0C4DH31 117 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 ZNF726A6NNF4 738 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 ZNF99A8MXY4 864 aaPredicted RBP13.3□□□□□ -0.28
PRKN-201ENST00000338468 BLOC1S5-TXNDC5H3BN57 136 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 RNF13O43567 381 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 SEC14L2O76054 403 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 FAM107AO95990 144 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 WNT11O96014 354 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 HIST1H2ABP04908 130 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 UMPSP11172 480 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 MSX2P35548 267 aaPredicted RBP13.3□□□□□ -0.28
PRKN-201ENST00000338468 AQP2P41181 271 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 FHL1Q13642 323 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 MELKQ14680 651 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 KRT72Q14CN4 511 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 IQCCQ4KMZ1 466 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 KLHL24Q6TFL4 600 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 FKBP9P1Q75LS8 142 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 HIST3H2AQ7L7L0 130 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 ZNF627Q7L945 461 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 MEX3DQ86XN8 651 aaKnown RBP13.3□□□□□ -0.28
PRKN-201ENST00000338468 MOSPD2Q8NHP6 518 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 TMEM171Q8WVE6 324 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 HIST1H2ACQ93077 130 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 RADILQ96JH8 1075 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 CDRT15Q96T59 188 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 GORASP2Q9H8Y8 452 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 SEC61A2Q9H9S3 476 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 ENPP4Q9Y6X5 453 aa13.3□□□□□ -0.28
PRKN-201ENST00000338468 CSPG4Q6UVK1 2322 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 A0A087WUU8 490 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 TMCC2O75069 709 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 IGLV1-44P01699 117 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 F13BP05160 661 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 PGA4P0DJD7 388 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 PGA3P0DJD8 388 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 HOXB1P14653 301 aaPredicted RBP13.29□□□□□ -0.28
PRKN-201ENST00000338468 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
PRKN-201ENST00000338468 MAKP20794 623 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 UBE2NP61088 152 aaKnown RBP13.29□□□□□ -0.28
PRKN-201ENST00000338468 RUNX1T1Q06455 604 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 LAPTM4AQ15012 233 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 TRAM2Q15035 370 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 Q5PR19 223 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 SHEQ5VZ18 495 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 LRFN4Q6PJG9 635 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 TBPL2Q6SJ96 375 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 SLC22A25Q6T423 547 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 DTX2Q86UW9 622 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 MYPOPQ86VE0 399 aaPredicted RBP13.29□□□□□ -0.28
PRKN-201ENST00000338468 PRIMA1Q86XR5 153 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 NRMQ8IXM6 262 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 ADAD1Q96M93 576 aaKnown RBP13.29□□□□□ -0.28
PRKN-201ENST00000338468 SLC38A2Q96QD8 506 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 SEPHS2Q99611 448 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 MDFIQ99750 246 aa13.29□□□□□ -0.28
PRKN-201ENST00000338468 TRAF4Q9BUZ4 470 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms