RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 OR1D4P47884 311 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 TRA2AQ13595 282 aaKnown RBP eCLIP11.35□□□□□ -0.59
FN1-202ENST00000336916 LRRC26Q2I0M4 334 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 PRICKLE2Q7Z3G6 844 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 IQCF1Q8N6M8 205 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SLC38A5Q8WUX1 472 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 ZBTB8AQ96BR9 441 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 PLCXD1Q9NUJ7 323 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 CYC1P08574 325 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 PTBP1P26599 531 aaKnown RBP eCLIP11.35□□□□□ -0.596e-7■■■□□ 19
FN1-202ENST00000336916 IDH3GP51553 393 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 CLDN17P56750 224 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SLC22A25Q6T423 547 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SHISA6Q6ZSJ9 500 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 MED25Q71SY5 747 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SSX8Q7RTT4 187 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 ADGRG3Q86Y34 549 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 TCTEX1D2Q8WW35 142 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 GMDSO60547 372 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SNCGO76070 127 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SERPINA7P05543 415 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 ELAVL4P26378 380 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 IMPA1P29218 277 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 P2RX1P51575 399 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 IKZF1Q13422 519 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 EXOSC7Q15024 291 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 MEX3BQ6ZN04 569 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 SLC23A2Q9UGH3 650 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 NOTOA8MTQ0 251 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 OR7C1O76099 320 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 NAGAP17050 411 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 TRHRP34981 398 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 GPR155Q7Z3F1 870 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 PHC2Q8IXK0 858 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 CMTM2Q8TAZ6 248 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 LIN37Q96GY3 246 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 YARS2Q9Y2Z4 477 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 COL6A6A6NMZ7 2263 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 TNFRSF10AO00220 468 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 ATXN1LP0C7T5 689 aaKnown RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 FAM189BP81408 668 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 NAA40Q86UY6 237 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 PRSS35Q8N3Z0 413 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 SPEM1Q8N4L4 309 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 GTF2H4Q92759 462 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 NRIP3Q9NQ35 241 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 CUEDC1Q9NWM3 386 aaPredicted RBP11.35□□□□□ -0.59
FN1-202ENST00000336916 GIMAP2Q9UG22 337 aa11.35□□□□□ -0.59
FN1-202ENST00000336916 HLA-HP01893 362 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 NID1P14543 1247 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 TBPP20226 339 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF252P-AS1Q0IIN9 211 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ENTHD1Q8IYW4 607 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 SPARTQ8N0X7 666 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 OR14J1Q9UGF5 321 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 TCRBV3S1A0A5B6 114 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 B4GAT1O43505 415 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 PLRG1O43660 514 aaKnown RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 NSA2O95478 260 aaKnown RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 EPHA1P21709 976 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF585AQ6P3V2 769 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 MAML2Q8IZL2 1156 aaPredicted RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 ASB13Q8WXK3 278 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 COQ10AQ96MF6 247 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 TMEM246Q9BRR3 403 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ADAMTS6Q9UKP5 1117 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF593O00488 134 aaPredicted RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF91Q05481 1191 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF573Q86YE8 665 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF687Q8N1G0 1237 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 OR10J5Q8NHC4 309 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 RTL8AQ9BWD3 113 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 NXF5Q9H1B4 397 aaKnown RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 NECAP2Q9NVZ3 263 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ALDH3B1P43353 468 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 GALEQ14376 348 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF791Q3KP31 576 aaPredicted RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 OR51J1Q9H342 316 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 HIF1ANQ9NWT6 349 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 CCL11P51671 97 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 SELENBP1Q13228 472 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 IL11RAQ14626 422 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 AADACL3Q5VUY0 350 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 SLC48A1Q6P1K1 146 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 TXLNGYQ9BZA5 131 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 NMNAT2Q9BZQ4 307 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ARFGEF3Q5TH69 2177 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 A0A087WV62 115 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 CHRM2P08172 466 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 RPS2P15880 293 aaKnown RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 FUT4P22083 530 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 CXADRP78310 365 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 CMTM4Q8IZR5 234 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 FGGYQ96C11 551 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF436Q9C0F3 470 aaPredicted RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 VAPAQ9P0L0 249 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 C20orf202A1L168 122 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms