RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SLITRK4Q8IW52 837 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 C19orf47Q8N9M1 422 aaKnown RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 WDR34Q96EX3 536 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 SAV1Q9H4B6 383 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 METTL7AQ9H8H3 244 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 DHDHQ9UQ10 334 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 WDFY4Q6ZS81 3184 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 METTL12A8MUP2 240 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 LGALS8O00214 317 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 AGPAT2O15120 278 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 SEC14L5O43304 696 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 ADAM11O75078 769 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 HTR3BO95264 441 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 SPI1P17947 270 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 CD1CP29017 333 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 P2RX3P56373 397 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 LTBQ06643 244 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 CAMK2DQ13557 499 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 EIF2B1Q14232 305 aaKnown RBP7.52□□□□□ -1.21
HPS4-201ENST00000336873 FCRL6Q6DN72 434 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 MAMSTRQ6ZN01 415 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 SLC25A44Q96H78 314 aaPredicted RBP7.52□□□□□ -1.21
HPS4-201ENST00000336873 ZNF681Q96N22 645 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 DHRS9Q9BPW9 319 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 BCL2L14Q9BZR8 327 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 ERVMER34-1Q9H9K5 563 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 C2orf42Q9NWW7 574 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 MED11Q9P086 117 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 EMC9Q9Y3B6 208 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 F5H5K5 113 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 H0YIG0 161 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 CREBL2O60519 120 aaPredicted RBP7.52□□□□□ -1.21
HPS4-201ENST00000336873 SLC22A5O76082 557 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 ITGA5P08648 1049 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 GABRG2P18507 467 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 CDK2P24941 298 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 HSD11B1P28845 292 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 FAUP35544 74 aaKnown RBP7.52□□□□□ -1.21
HPS4-201ENST00000336873 PI4KAP42356 2102 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 AP3S2P59780 193 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 ACTC1P68032 377 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 ACTA1P68133 377 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 PSG6Q00889 435 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 DUSP8Q13202 625 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 BTN1A1Q13410 526 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 ASAH1Q13510 395 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 DUSP6Q16828 381 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 Q5BKY6 102 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 NKAPLQ5M9Q1 402 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 CHRDL2Q6WN34 429 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 COX15Q7KZN9 410 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 RHOUQ7L0Q8 258 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 COMMD7Q86VX2 200 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 ZNF227Q86WZ6 799 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 RASGRP3Q8IV61 690 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 CA13Q8N1Q1 262 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 OR2T4Q8NH00 348 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 VOPP1Q96AW1 172 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 OR1F2PQ96R84 312 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 MESP1Q9BRJ9 268 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 SCPEP1Q9HB40 452 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 IFT46Q9NQC8 304 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 EPHA6Q9UF33 1036 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 TESQ9UGI8 421 aaKnown RBP7.52□□□□□ -1.21
HPS4-201ENST00000336873 SESN1Q9Y6P5 492 aa7.52□□□□□ -1.21
HPS4-201ENST00000336873 IGHV5-51A0A0C4DH38 117 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 DCTN6O00399 190 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 PDCD5O14737 125 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 ZNF264O43296 627 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 CHP2O43745 196 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 SCGB1D2O95969 90 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 HPXP02790 462 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 C4BPBP20851 252 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 S1PR1P21453 382 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 GZMKP49863 264 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 TEKQ02763 1124 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 CD226Q15762 336 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 GRK1Q15835 563 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 GLYATL3Q5SZD4 288 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 C9orf135Q5VTT2 229 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 LCN10Q6JVE6 187 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 LANCL3Q6ZV70 420 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.51□□□□□ -1.21
HPS4-201ENST00000336873 BCORP1Q8N888 145 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 RELL2Q8NC24 303 aaPredicted RBP7.51□□□□□ -1.21
HPS4-201ENST00000336873 OR51S1Q8NGJ8 323 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 NXPE2Q96DL1 559 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 CPNE2Q96FN4 548 aaPredicted RBP7.51□□□□□ -1.21
HPS4-201ENST00000336873 SNX18Q96RF0 628 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 IER2Q9BTL4 223 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 AKAP7Q9P0M2 348 aaPredicted RBP7.51□□□□□ -1.21
HPS4-201ENST00000336873 LSM2Q9Y333 95 aaKnown RBP7.51□□□□□ -1.21
HPS4-201ENST00000336873 PKDREJQ9NTG1 2253 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 CCDC163A0A0D9SF12 145 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 OR5K3A6NET4 321 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 PRAMEF26H0Y7S4 382 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 PLRG1O43660 514 aaKnown RBP7.51□□□□□ -1.21
HPS4-201ENST00000336873 ICOSLGO75144 302 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 ALX3O95076 343 aa7.51□□□□□ -1.21
HPS4-201ENST00000336873 CYB5AP00167 134 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms