RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 TMEM109Q9BVC6 243 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PACSIN1Q9BY11 444 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ITPAQ9BY32 194 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 DERL2Q9GZP9 239 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 IL22Q9GZX6 179 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 IQCGQ9H095 443 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 OPN3Q9H1Y3 402 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC134Q9H6E4 229 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HES4Q9HCC6 221 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 B3GAT2Q9NPZ5 323 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MBNL3Q9NUK0 354 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NMRK1Q9NWW6 199 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ALKBH4Q9NXW9 302 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NUDT4Q9NZJ9 180 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PCYOX1Q9UHG3 505 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TMED5Q9Y3A6 229 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 NAALAD2Q9Y3Q0 740 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 IGHV1-69-2A0A0G2JMI3 117 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TRIM64CA6NLI5 447 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 BOLA2-SMG1P6H3BVE0 249 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SCAMP3O14828 347 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HAT1O14929 419 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RTL8CO15255 209 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 H2AFYO75367 372 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PEX14O75381 377 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SASH3O75995 380 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 DFFBO76075 338 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 OR2A4O95047 310 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ACSL3O95573 720 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TTC4O95801 387 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MT-CYBP00156 380 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 KRT8P05787 483 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CRYBA1P05813 215 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RBMY1CP0DJD4 496 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 OR5H8P0DN80 308 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PTX3P26022 381 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PSMB5P28074 263 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PEX2P28328 305 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 IMPA1P29218 277 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ETV4P43268 484 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MTIF2P46199 727 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 KCNJ3P48549 501 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CYP2J2P51589 502 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RAB10P61026 200 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SLC17A1Q14916 467 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 KRT31Q15323 416 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RBMY1FQ15415 496 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 GUK1Q16774 197 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HADHQ16836 314 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RGS21Q2M5E4 152 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TBRG1Q3YBR2 411 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 FAM76BQ5HYJ3 339 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SLC48A1Q6P1K1 146 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TMEM53Q6P2H8 277 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TIFABQ6ZNK6 161 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RAPH1Q70E73 1250 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PXKQ7Z7A4 578 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CROCCP2Q86T23 111 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TMEM139Q8IV31 216 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ANKMY2Q8IV38 441 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 FAM9CQ8IZT9 166 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 C17orf53Q8N3J3 647 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 LINC00612Q8N6U2 182 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 BHLHE23Q8NDY6 225 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 FAM172AQ8WUF8 416 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SLC47A1Q96FL8 570 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 EAF1Q96JC9 268 aaPredicted RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RPL10LQ96L21 214 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 RILPQ96NA2 401 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 OR5M11Q96RB7 305 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MNTQ99583 582 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SNRNP25Q9BV90 132 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SPATA9Q9BWV2 254 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 MAK16Q9BXY0 300 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 BPESC1Q9GZL8 116 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 AICDAQ9GZX7 198 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 CDIP1Q9H305 208 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ELOVL3Q9HB03 270 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HINT3Q9NQE9 182 aaKnown RBP1.21□□□□□ -2.22
LINC00643-201ENST00000334389 INPP5EQ9NRR6 644 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 PPP1R14DQ9NXH3 145 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ETAA1Q9NY74 926 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 TAS2R3Q9NYW6 316 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 HAO1Q9UJM8 370 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 ICAM5Q9UMF0 924 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 SLC12A4Q9UP95 1085 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 COQ6Q9Y2Z9 468 aa1.21□□□□□ -2.22
LINC00643-201ENST00000334389 A0A0J9YVX5 310 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 BTBD17A6NE02 478 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 OR2AG2A6NM03 316 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 E7EVH7 732 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 M0R233 179 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 PDPK1O15530 556 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 TPST2O60704 377 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 MFAP3LO75121 409 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 ICOSLGO75144 302 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 CSN2P05814 226 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 GLAP06280 429 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 GSTA1P08263 222 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 PDHA1P08559 390 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms