RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 FLVCR2Q9UPI3 526 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 PCDHGA9Q9Y5G4 932 aaKnown RBP17.15■□□□□ 0.34
RFTN1-201ENST00000334133 FREM2Q5SZK8 3169 aa17.14■□□□□ 0.34
RFTN1-201ENST00000334133 TCRBV16S1A1N1A0A5B0 115 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 TSC22D2O75157 780 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 SLC25A12O75746 678 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 TMIGD3P0DMS9 266 aaPredicted RBP17.14■□□□□ 0.33
RFTN1-201ENST00000334133 ADH7P40394 386 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 MELKQ14680 651 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 MEP1BQ16820 701 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 CCDC58Q4VC31 144 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 OGFOD3Q6PK18 319 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 OVCH1Q7RTY7 1134 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 SIX5Q8N196 739 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 SLC25A38Q96DW6 304 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 KLK11Q9UBX7 282 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 ITGB1BP2Q9UKP3 347 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 MMACHCQ9Y4U1 282 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 ADRA2CP18825 462 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 IL11P20809 199 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 MRPL28Q13084 256 aaKnown RBP17.14■□□□□ 0.33
RFTN1-201ENST00000334133 HYAL4Q2M3T9 481 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 TMEM255AQ5JRV8 349 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 FAM199XQ6PEV8 388 aaPredicted RBP17.14■□□□□ 0.33
RFTN1-201ENST00000334133 UNQ9370/PRO34162Q6UXP9 181 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 C1orf216Q8TAB5 229 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 NSMAFQ92636 917 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 DPAGT1Q9H3H5 408 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 HSPB11Q9Y547 144 aa17.14■□□□□ 0.33
RFTN1-201ENST00000334133 TRAV8-7A0A075B6U6 113 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 TRABD2BA6NFA1 517 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 CXCL3P19876 107 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 GDNFP39905 211 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 GZMKP49863 264 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 DMWDQ09019 674 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
RFTN1-201ENST00000334133 TMPRSS9Q7Z410 1059 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 TCTE3Q8IZS6 198 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 ZNF676Q8N7Q3 588 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 SLC7A5P2Q9GIP4 190 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 LAT2Q9GZY6 243 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 ADAM19Q9H013 955 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 MED28Q9H204 178 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 TCF7L1Q9HCS4 588 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 FSCN3Q9NQT6 498 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 SLCO1C1Q9NYB5 712 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 COPS7AQ9UBW8 275 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 RCE1Q9Y256 329 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 FABP7O15540 132 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 GMDSO60547 372 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 ZNF354AO60765 605 aaPredicted RBP17.13■□□□□ 0.33
RFTN1-201ENST00000334133 BIKQ13323 160 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 SNTB2Q13425 540 aaKnown RBP17.13■□□□□ 0.33
RFTN1-201ENST00000334133 ALKBH1Q13686 389 aaKnown RBP17.13■□□□□ 0.33
RFTN1-201ENST00000334133 MDGA2Q7Z553 956 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 OR2T4Q8NH00 348 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 OR52I2Q8NH67 350 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 HAVCR2Q8TDQ0 301 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 GPR119Q8TDV5 335 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 METTL21AQ8WXB1 218 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 OR1F2PQ96R84 312 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
RFTN1-201ENST00000334133 KCNK15Q9H427 330 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 SYNDIG1Q9H7V2 258 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 V9GY05 133 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 DUX1O43812 170 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 GPRIN2O60269 458 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 RENP00797 406 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 MMP15P51511 669 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 IL10RAQ13651 578 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 YIF1BQ5BJH7 314 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 STAC2Q6ZMT1 411 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 TMPRSS12Q86WS5 348 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 PLXDC1Q8IUK5 500 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 OR11H7Q8NGC8 314 aa17.13■□□□□ 0.33
RFTN1-201ENST00000334133 EXOSC3Q9NQT5 275 aaKnown RBP17.13■□□□□ 0.33
RFTN1-201ENST00000334133 MRTO4Q9UKD2 239 aaKnown RBP17.13■□□□□ 0.33
RFTN1-201ENST00000334133 TSPAN2O60636 221 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 GALNSP34059 522 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 CAPZA2P47755 286 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 MAB21L1Q13394 359 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 ACKR1Q16570 336 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 SLC29A4Q7RTT9 530 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 CDC20BQ86Y33 519 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 LILRB4Q8NHJ6 448 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 SYNPRQ8TBG9 265 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 DAZLQ92904 295 aaKnown RBP17.12■□□□□ 0.33
RFTN1-201ENST00000334133 CAMK2AQ9UQM7 478 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 SUSD5O60279 629 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 MPZL1O95297 269 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 DHFRP00374 187 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 DCNP07585 359 aaKnown RBP17.12■□□□□ 0.33
RFTN1-201ENST00000334133 GP1BBP13224 206 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 HLA-DOBP13765 273 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 SLC25A1P53007 311 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 ISXQ2M1V0 245 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 UBE2NLQ5JXB2 153 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 FAM69BQ5VUD6 431 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 SLC38A9Q8NBW4 561 aa17.12■□□□□ 0.33
RFTN1-201ENST00000334133 MRPL48Q96GC5 212 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms