RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LRP5LA4QPB2 252 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OR4Q2P0C623 313 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 GDI1P31150 447 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 MC3RP41968 323 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 HSF5Q4G112 596 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 CYB561A3Q8NBI2 242 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OR1S2Q8NGQ3 325 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TEPSINQ96N21 525 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 SRA1Q9HD15 236 aaKnown RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 NOX4Q9NPH5 578 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 SERINC1Q9NRX5 453 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 IL5P05113 134 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 NHLH2Q02577 135 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PPA1Q15181 289 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ZC3H14Q6PJT7 736 aaKnown RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 SIGLECL1Q8N7X8 197 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 MUTYHQ9UIF7 546 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 SLC35A3Q9Y2D2 325 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 EDDM13A0A1B0GTR0 161 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TCRBV5S1A1TA0A578 114 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 MSTNO14793 375 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 HPNP05981 417 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 LIPCP11150 499 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 FPR3P25089 353 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 SHC1P29353 583 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 CD80P33681 288 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 HLXQ14774 488 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OTUD1Q5VV17 481 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 CABLES2Q9BTV7 478 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 CHRDQ9H2X0 955 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 HRASLSQ9HDD0 168 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ACER3Q9NUN7 267 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TDP1Q9NUW8 608 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 USP36Q9P275 1121 aaKnown RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 WASF3Q9UPY6 502 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PRRC2AP48634 2157 aaKnown RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OR5K4A6NMS3 321 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 FZD9O00144 591 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 CST2P09228 141 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 MAKP20794 623 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 MPEG1Q2M385 716 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ARSIQ5FYB1 569 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 VWA2Q5GFL6 755 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 DBX2Q6ZNG2 339 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM234Q8WY98 164 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM106AQ96A25 262 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 LTB4R2Q9NPC1 389 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PRODH2Q9UF12 536 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 DSCAML1Q8TD84 2053 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 MEIKINA0A087WXM9 373 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 RFPL4AA6NLU0 287 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 RFPL4AL1F8VTS6 287 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 CRHR2Q13324 411 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ARHGAP19Q14CB8 494 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 SLC9A3R2Q15599 337 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF628Q5EBL2 1059 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 RPUSD3Q6P087 351 aaKnown RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 KIAA0907Q7Z7F0 614 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 HMGN2P46Q86SG4 172 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TP53I13Q8NBR0 393 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OR52I2Q8NH67 350 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OR1S1Q8NH92 325 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OR14L1PQ8NHC6 308 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 DMRT1Q9Y5R6 373 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 CFAP20Q9Y6A4 193 aaKnown RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 USP3Q9Y6I4 520 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TRAV27A0A087WT01 109 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 FEZF1A0PJY2 475 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 FAM227AF5H4B4 570 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 FABP4P15090 132 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 NQO2P16083 231 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TACR3P29371 465 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF136P52737 540 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 COX20Q5RI15 118 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 GPRIN1Q7Z2K8 1008 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF551Q7Z340 670 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 OR51L1Q8NGJ5 315 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 RSC1A1Q92681 617 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 RSPRY1Q96DX4 576 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 HHIPL1Q96JK4 782 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF558Q96NG5 402 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PELI2Q9HAT8 420 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 B3GAT2Q9NPZ5 323 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PADI3Q9ULW8 664 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 GAB2Q9UQC2 676 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TIMM8BQ9Y5J9 83 aaPredicted RBP6.54□□□□□ -1.36
SMC1A-201ENST00000322213 V9GYH0 126 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM150CB9EJG8 249 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 H0YIV9 168 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ICAM2P13598 275 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 C5AR1P21730 350 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PPP1R1CQ8WVI7 109 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 FAM3DQ96BQ1 224 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 NMNAT2Q9BZQ4 307 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 LMAN1LQ9HAT1 526 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 PLEKHA2Q9HB19 425 aa6.54□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF586Q9NXT0 402 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms