RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 FZD2Q14332 565 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 MPPED2Q15777 294 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 TMEM176BQ3YBM2 270 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LHFPL2Q6ZUX7 228 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 HSD11B1LQ7Z5J1 315 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 RBMXL1Q96E39 390 aaKnown RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SLC6A7Q99884 636 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ALG12Q9BV10 488 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 EIF5A2Q9GZV4 153 aaKnown RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ZCCHC4Q9H5U6 513 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 BCO1Q9HAY6 547 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 KCNJ16Q9NPI9 418 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 TAS2R3Q9NYW6 316 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 CACNG4Q9UBN1 327 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 GPR45Q9Y5Y3 372 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 TMEM200CA6NKL6 621 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 PIAS2O75928 621 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 UTS2O95399 124 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 MBP02144 154 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 MAOAP21397 527 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 CSN1S1P47710 185 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ALDH3B2P48448 385 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 DLX5P56178 289 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 AARDQ4LEZ3 155 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 PAGE3Q5JUK9 113 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 UBE2NLQ5JXB2 153 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 PXDC1Q5TGL8 231 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LHX8Q68G74 356 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 PLBD1Q6P4A8 553 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SLC22A25Q6T423 547 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR8H3Q8N146 312 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR5D13Q8NGL4 314 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR9I1Q8NGQ6 314 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR13J1Q8NGT2 312 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR8K3Q8NH51 312 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR56B4Q8NH76 319 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR1S1Q8NH92 325 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 CMTM2Q8TAZ6 248 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LIPHQ8WWY8 451 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SLC30A3Q99726 388 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 NXF5Q9H1B4 397 aaKnown RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 EBF2Q9HAK2 575 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 C1RLQ9NZP8 487 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 DNAJC27Q9NZQ0 273 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 MED16Q9Y2X0 877 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 UGT2A1Q9Y4X1 527 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SH2D1BO14796 132 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 YY2O15391 372 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ITM2AO43736 263 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SLC16A7O60669 478 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR7C1O76099 320 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LGI1O95970 557 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LAMP1P11279 417 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 BCKDHBP21953 392 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 PTAFRP25105 342 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 CD1CP29017 333 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ZNF93P35789 620 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 RBP2P50120 134 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 AGFG1P52594 562 aaKnown RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 CDKN2DP55273 166 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SCAND1P57086 179 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 BLOC1S1P78537 153 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ARL16Q0P5N6 197 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 RBMS2Q15434 407 aaKnown RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 TRIP6Q15654 476 aaKnown RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 HFEQ30201 348 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LRRC10Q5BKY1 277 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 FAM162BQ5T6X4 162 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LIPKQ5VXJ0 399 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 FAM199XQ6PEV8 388 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 FAM185AQ8N0U4 392 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 CHDHQ8NE62 594 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR4D6Q8NGJ1 314 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 OR10J5Q8NHC4 309 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 TMEM163Q8TC26 289 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 FBXW5Q969U6 566 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 C10orf35Q96D05 121 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SAMD8Q96LT4 415 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 C1QTNF3Q9BXJ4 246 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 HSD3B7Q9H2F3 369 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 FAM212BQ9NTI7 297 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ERVK13-1Q9NX77 482 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 TRAPPC2LQ9UL33 140 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 GPR55Q9Y2T6 319 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 LOXL2Q9Y4K0 774 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 NUBP2Q9Y5Y2 271 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 MDFIC2A0A1B0GVS7 189 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 PRAMEF27A3QJZ7 478 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 FAM149AA5PLN7 773 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SGCEO43556 437 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 RAB3DO95716 219 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 ZNF728P0DKX0 622 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 NAT2P11245 290 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 BRS3P32247 399 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SGSHP51688 502 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 TMPRSS3P57727 454 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 SF3A2Q15428 464 aaKnown RBP2.94□□□□□ -1.94
CLOCK-201ENST00000309964 Q499Y3 187 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 KRTCAP3Q53RY4 240 aa2.94□□□□□ -1.94
CLOCK-201ENST00000309964 CMPK2Q5EBM0 449 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms