RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 BAIAP2L2Q6UXY1 529 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 SLC35F3Q8IY50 421 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 C12orf45Q8N5I9 185 aaPredicted RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 DCUN1D4Q92564 292 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 OR1F2PQ96R84 312 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 ZNF700Q9H0M5 742 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 KCND3Q9UK17 655 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 CA14Q9ULX7 337 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 PLCL2Q9UPR0 1127 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 PLXNB2O15031 1838 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 C4orf47A7E2U8 309 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 F8W036 122 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 SYT7O43581 403 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 FADS1O60427 444 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 CISD3P0C7P0 127 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 BLOC1S1P78537 153 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 Q499Y3 187 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 Q5BKY6 102 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 VWA2Q5GFL6 755 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 MAMDC2Q7Z304 686 aaPredicted RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 GTPBP8Q8N3Z3 284 aaPredicted RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 STEAP2Q8NFT2 490 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 CD300LFQ8TDQ1 290 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 FBLIM1Q8WUP2 373 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 KIAA1143Q96AT1 154 aaPredicted RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 P2RY10O00398 339 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 ZFPL1O95159 310 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 CD3DP04234 171 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 RORAP35398 523 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 FXYD4P59646 89 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 TMEM196Q5HYL7 178 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 UBE2NLQ5JXB2 153 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 PRAMEF8Q5VWM4 474 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 PRAMEF7Q5VXH5 474 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 TMEM88Q6PEY1 159 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 C16orf47Q6ZP98 133 aaPredicted RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 ANKRD33Q7Z3H0 272 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 OR4K17Q8NGC6 315 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 OR10K1Q8NGX5 313 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 RBPMSQ93062 196 aaKnown RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 HDAC8Q9BY41 377 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 ERVMER34-1Q9H9K5 563 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 SIGLEC7Q9Y286 467 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 A0A0B4J2A0 478 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 CELA2BP08218 269 aaPredicted RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 CALCBP10092 127 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 HTR2AP28223 471 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 RBM34P42696 430 aaKnown RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 GK2Q14410 553 aaPredicted RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 EEF1A1P5Q5VTE0 462 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 GSG1LQ6UXU4 331 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 ABHD12BQ7Z5M8 362 aaPredicted RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 RNF113BQ8IZP6 322 aaKnown RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 TOR1AIP2Q8NFQ8 470 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 C16orf52Q8NHV5 167 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 ZNF417Q8TAU3 575 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 TSLPQ969D9 159 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 SHPKQ9UHJ6 478 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 IFITM5A6NNB3 132 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 C4orf51C9J302 202 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 CRTAPO75718 401 aaPredicted RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 CSTBP04080 98 aaKnown RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 AKAIN1P0CW23 69 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 AMY2BP19961 511 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 ARHGAP11BQ3KRB8 267 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 SLC38A6Q8IZM9 456 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 ZNF784Q8NCA9 323 aaPredicted RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 ZBTB8AQ96BR9 441 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 NPFFR2Q9Y5X5 522 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
CASC4-201ENST00000299957 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 ABCA7Q8IZY2 2146 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 ZNF264O43296 627 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 SEC14L5O43304 696 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 MOSPD3O75425 235 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 CD14P08571 375 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 SELENOPP49908 381 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 TAS2R20P59543 309 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 FAM76BQ5HYJ3 339 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 TEX261Q6UWH6 196 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 SHISA5Q8N114 240 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 MAFIPQ8WZ33 124 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 WDR76Q9H967 626 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 LHX9Q9NQ69 397 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 SDHAF3Q9NRP4 125 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 UBQLN4Q9NRR5 601 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 U3KQ87 197 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 CASP8AP2Q9UKL3 1982 aa12.18□□□□□ -0.46
CASC4-201ENST00000299957 TMEM82A0PJX8 343 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 OR6C68A6NDL8 312 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 PYCARD-AS1I3L0S3 204 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms