RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ZP4Q12836 540 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 MELKQ14680 651 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 GINS1Q14691 196 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 SLC17A1Q14916 467 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 MAD2L1BPQ15013 274 aaPredicted RBP13.49□□□□□ -0.25
CCDC140-201ENST00000295226 PTGES3Q15185 160 aaKnown RBP13.49□□□□□ -0.25
CCDC140-201ENST00000295226 SLC35F1Q5T1Q4 408 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 ACSM5Q6NUN0 579 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 SEM1Q6ZVN7 128 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 P4HA3Q7Z4N8 544 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 PARP8Q8N3A8 854 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 C9orf106Q8NAJ2 232 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 C12orf43Q96C57 262 aaKnown RBP13.49□□□□□ -0.25
CCDC140-201ENST00000295226 OXGR1Q96P68 337 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 SH3GL3Q99963 347 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 EMC6Q9BV81 110 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 INIPQ9NRY2 104 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 MED29Q9NX70 200 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 IER3IP1Q9Y5U9 82 aa13.49□□□□□ -0.25
CCDC140-201ENST00000295226 ZNF716A6NP11 495 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 M0R129 80 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 IFNGR1P15260 489 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 ACVR2AP27037 513 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 NTF4P34130 210 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 PRPS1P60891 318 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 RBPJQ06330 500 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 C1DQ13901 141 aaKnown RBP13.48□□□□□ -0.25
CCDC140-201ENST00000295226 EEF1A1P5Q5VTE0 462 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 XAF1Q6GPH4 301 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 ABLIM2Q6H8Q1 611 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 NHLRC1Q6VVB1 395 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.48□□□□□ -0.25
CCDC140-201ENST00000295226 GCNT2Q8N0V5 402 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 BPIFB6Q8NFQ5 453 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 OR9K2Q8NGE7 335 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 TEX47Q8TBZ9 253 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 ZNF385AQ96PM9 386 aaKnown RBP13.48□□□□□ -0.25
CCDC140-201ENST00000295226 ZNF346Q9UL40 294 aaKnown RBP13.48□□□□□ -0.25
CCDC140-201ENST00000295226 OSGIN2Q9Y236 505 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 RASD1Q9Y272 281 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 POLEQ07864 2286 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 DOCK7Q96N67 2140 aa13.48□□□□□ -0.25
CCDC140-201ENST00000295226 FIGNL2A6NMB9 653 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 WDR1O75083 606 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 ZNF43P17038 809 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 SLC6A6P31641 620 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 GGT2P36268 569 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 GIPRP48546 466 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 ACKR1Q16570 336 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 C1orf185Q5T7R7 199 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 GPR107Q5VW38 600 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 NSUN5P2Q63ZY6 315 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 LAIR2Q6ISS4 152 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 MYO7BQ6PIF6 2116 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 CREB3L2Q70SY1 520 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 PXKQ7Z7A4 578 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 UEVLDQ8IX04 471 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 TUSC5Q8IXB3 177 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 CLDN22Q8N7P3 220 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 OR52L1Q8NGH7 329 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 MUL1Q969V5 352 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 RASD2Q96D21 266 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 Q96M85 177 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 ERMAPQ96PL5 475 aaPredicted RBP13.47□□□□□ -0.25
CCDC140-201ENST00000295226 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 POLDIP3Q9BY77 421 aaKnown RBP13.47□□□□□ -0.25
CCDC140-201ENST00000295226 CALHM2Q9HA72 323 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 PLCXD1Q9NUJ7 323 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 RELNP78509 3460 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 TRGV8A0A0C4DH27 118 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 A0A1W2PNV4 684 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 B8ZZF3 427 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 BHLHE40O14503 412 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 IMPA2O14732 288 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 TRAF3IP2O43734 574 aaPredicted RBP13.47□□□□□ -0.25
CCDC140-201ENST00000295226 MPZL2O60487 215 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 TOXO94900 526 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 SLC2A10O95528 541 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 CD14P08571 375 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 GABRA1P14867 456 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 PCSK6P29122 969 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 CLDN17P56750 224 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 SLC35A2P78381 396 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 CDK5Q00535 292 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 DPY19L2P2Q6ZN68 376 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 SLC35D2Q76EJ3 337 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 UBE2FQ969M7 185 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 INTS12Q96CB8 462 aaKnown RBP13.47□□□□□ -0.25
CCDC140-201ENST00000295226 RNF122Q9H9V4 155 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 NRIP3Q9NQ35 241 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 ZNF175Q9Y473 711 aa13.47□□□□□ -0.25
CCDC140-201ENST00000295226 ARHGAP21Q5T5U3 1957 aa13.46□□□□□ -0.25
CCDC140-201ENST00000295226 A0A1W2PRG6 482 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms