RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 RLN1P04808 185 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 RBM34P42696 430 aaKnown RBP15.09■□□□□ 0.01
VPS54-201ENST00000272322 FUT7Q11130 342 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 NDUFA5Q16718 116 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 CDONQ4KMG0 1287 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 CORO6Q6QEF8 472 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 LINC00346Q8IVM7 164 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 OR52B4Q8NGK2 314 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 CREB3L1Q96BA8 519 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 SPATA2Q9UM82 520 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 BAIAP2Q9UQB8 552 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 V9GY05 133 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 EML5Q05BV3 1969 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 CPED1A4D0V7 1026 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 XKRYO14609 159 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 RGS13O14921 159 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 ZNF749O43361 778 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 UBL3O95164 117 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 SIX6O95475 246 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 HLA-DQB1P01920 261 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 ADRA2CP18825 462 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 CDK2P24941 298 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 ARRB1P49407 418 aaPredicted RBP15.09■□□□□ 0.01
VPS54-201ENST00000272322 POU4F2Q12837 409 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 SLC6A19Q695T7 634 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 LINC00114Q6XXX2 140 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 MAMSTRQ6ZN01 415 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 GRAMD2AQ8IUY3 354 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 OR5M1Q8NGP8 315 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 OR2T35Q8NGX2 323 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 OR1L3Q8NH93 324 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 METTL17Q9H7H0 456 aaPredicted RBP15.09■□□□□ 0.01
VPS54-201ENST00000272322 ANKRD10Q9NXR5 420 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 PRODH2Q9UF12 536 aa15.09■□□□□ 0.01
VPS54-201ENST00000272322 PPIEQ9UNP9 301 aaKnown RBP15.09■□□□□ 0.01
VPS54-201ENST00000272322 PPM1BO75688 479 aa15.08■□□□□ 0.01
VPS54-201ENST00000272322 WNT11O96014 354 aa15.08■□□□□ 0.01
VPS54-201ENST00000272322 SKP2Q13309 424 aa15.08■□□□□ 0.01
VPS54-201ENST00000272322 ATG4DQ86TL0 474 aaPredicted RBP15.08■□□□□ 0.01
VPS54-201ENST00000272322 ARHGEF39Q8N4T4 335 aa15.08■□□□□ 0.01
VPS54-201ENST00000272322 EMC6Q9BV81 110 aa15.08■□□□□ 0.01
VPS54-201ENST00000272322 ELOVL3Q9HB03 270 aa15.08■□□□□ 0.01
VPS54-201ENST00000272322 GMEB2Q9UKD1 530 aa15.08■□□□□ 0.01
VPS54-201ENST00000272322 ASPMQ8IZT6 3477 aa15.08■□□□□ 0
VPS54-201ENST00000272322 DCDC2BA2VCK2 349 aa15.08■□□□□ 0
VPS54-201ENST00000272322 FAM221BA6H8Z2 402 aa15.08■□□□□ 0
VPS54-201ENST00000272322 OGG1O15527 345 aa15.08■□□□□ 0
VPS54-201ENST00000272322 NOS1APO75052 506 aaPredicted RBP15.08■□□□□ 0
VPS54-201ENST00000272322 RORAP35398 523 aa15.08■□□□□ 0
VPS54-201ENST00000272322 PRPS1P60891 318 aa15.08■□□□□ 0
VPS54-201ENST00000272322 STAC2Q6ZMT1 411 aa15.08■□□□□ 0
VPS54-201ENST00000272322 Q6ZTK2 550 aa15.08■□□□□ 0
VPS54-201ENST00000272322 GKN2Q86XP6 184 aa15.08■□□□□ 0
VPS54-201ENST00000272322 POMGNT2Q8NAT1 580 aa15.08■□□□□ 0
VPS54-201ENST00000272322 ZFAND1Q8TCF1 268 aa15.08■□□□□ 0
VPS54-201ENST00000272322 OR5V1Q9UGF6 321 aa15.08■□□□□ 0
VPS54-201ENST00000272322 ITGB1BP2Q9UKP3 347 aa15.08■□□□□ 0
VPS54-201ENST00000272322 ZNF593O00488 134 aaPredicted RBP15.08■□□□□ 0
VPS54-201ENST00000272322 EFNB2P52799 333 aa15.08■□□□□ 0
VPS54-201ENST00000272322 HSD17B7P56937 341 aa15.08■□□□□ 0
VPS54-201ENST00000272322 FMODQ06828 376 aa15.08■□□□□ 0
VPS54-201ENST00000272322 THOC7Q6I9Y2 204 aaKnown RBP15.08■□□□□ 0
VPS54-201ENST00000272322 TSSK4Q6SA08 328 aa15.08■□□□□ 0
VPS54-201ENST00000272322 ZSCAN1Q8NBB4 408 aa15.08■□□□□ 0
VPS54-201ENST00000272322 LCORQ96JN0 433 aaPredicted RBP15.08■□□□□ 0
VPS54-201ENST00000272322 CENPMQ9NSP4 180 aa15.08■□□□□ 0
VPS54-201ENST00000272322 KLHL21Q9UJP4 597 aa15.08■□□□□ 0
VPS54-201ENST00000272322 NPFFR2Q9Y5X5 522 aa15.08■□□□□ 0
VPS54-201ENST00000272322 GDF9O60383 454 aa15.07■□□□□ 0
VPS54-201ENST00000272322 C1QBP02746 253 aa15.07■□□□□ 0
VPS54-201ENST00000272322 POU4F3Q15319 338 aa15.07■□□□□ 0
VPS54-201ENST00000272322 LRFN4Q6PJG9 635 aa15.07■□□□□ 0
VPS54-201ENST00000272322 SLC25A38Q96DW6 304 aa15.07■□□□□ 0
VPS54-201ENST00000272322 HAO2Q9NYQ3 351 aa15.07■□□□□ 0
VPS54-201ENST00000272322 ZNF69Q9UC07 566 aa15.07■□□□□ 0
VPS54-201ENST00000272322 LIPCP11150 499 aa15.07■□□□□ 0
VPS54-201ENST00000272322 RAD52P43351 418 aa15.07■□□□□ 0
VPS54-201ENST00000272322 SELENOPP49908 381 aa15.07■□□□□ 0
VPS54-201ENST00000272322 C9orf40Q8IXQ3 194 aa15.07■□□□□ 0
VPS54-201ENST00000272322 GALNT6Q8NCL4 622 aa15.07■□□□□ 0
VPS54-201ENST00000272322 ING4Q9UNL4 249 aa15.07■□□□□ 0
VPS54-201ENST00000272322 CLPSP04118 112 aa15.07■□□□□ 0
VPS54-201ENST00000272322 INPP5JQ15735 1006 aaPredicted RBP15.07■□□□□ 0
VPS54-201ENST00000272322 C8orf44Q96CB5 159 aa15.07■□□□□ 0
VPS54-201ENST00000272322 KCTD12Q96CX2 325 aaKnown RBP15.07■□□□□ 0
VPS54-201ENST00000272322 POLE3Q9NRF9 147 aa15.07■□□□□ 0
VPS54-201ENST00000272322 TAS2R10Q9NYW0 307 aa15.07■□□□□ 0
VPS54-201ENST00000272322 BCKDHBP21953 392 aa15.06■□□□□ 0
VPS54-201ENST00000272322 CFHR1Q03591 330 aa15.06■□□□□ 0
VPS54-201ENST00000272322 ACKR1Q16570 336 aa15.06■□□□□ 0
VPS54-201ENST00000272322 FAM199XQ6PEV8 388 aaPredicted RBP15.06■□□□□ 0
VPS54-201ENST00000272322 LUZP2Q86TE4 346 aa15.06■□□□□ 0
VPS54-201ENST00000272322 LANCL2Q9NS86 450 aa15.06■□□□□ 0
VPS54-201ENST00000272322 CDV3Q9UKY7 258 aaKnown RBP15.06■□□□□ 0
VPS54-201ENST00000272322 SDHAP31040 664 aa15.06■□□□□ 0
VPS54-201ENST00000272322 TCTE3Q8IZS6 198 aa15.06■□□□□ 0
VPS54-201ENST00000272322 OMA1Q96E52 524 aa15.06■□□□□ 0
VPS54-201ENST00000272322 S100A16Q96FQ6 103 aaKnown RBP15.06■□□□□ 0
VPS54-201ENST00000272322 GDF15Q99988 308 aa15.06■□□□□ 0
VPS54-201ENST00000272322 MED29Q9NX70 200 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms