RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 VSX1Q9NZR4 365 aaPredicted RBP11.55□□□□□ -0.56
LSM8-201ENST00000249299 EMC3Q9P0I2 261 aa11.55□□□□□ -0.56
LSM8-201ENST00000249299 KLHL9Q9P2J3 617 aa11.55□□□□□ -0.56
LSM8-201ENST00000249299 SPRR3Q9UBC9 169 aa11.55□□□□□ -0.56
LSM8-201ENST00000249299 SEC14L4Q9UDX3 406 aa11.55□□□□□ -0.56
LSM8-201ENST00000249299 WARS2Q9UGM6 360 aaKnown RBP11.55□□□□□ -0.56
LSM8-201ENST00000249299 NPIPA1Q9UND3 350 aa11.55□□□□□ -0.56
LSM8-201ENST00000249299 MOKQ9UQ07 419 aa11.55□□□□□ -0.56
LSM8-201ENST00000249299 ACACBO00763 2458 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 TEX13CA0A0J9YWL9 993 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 PRSS37A4D1T9 235 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 EFCAB10A6NFE3 127 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 OR6C65A6NJZ3 312 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 CLCA1A8K7I4 914 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 ZNF724A8MTY0 619 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 NPIPA2E9PIF3 369 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 NPIPA3F8WFD2 350 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 SLC1A7O00341 560 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 RENP00797 406 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 IFNGR1P15260 489 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 HTR1FP30939 366 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 POU3F1Q03052 451 aaPredicted RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.54□□□□□ -0.56
LSM8-201ENST00000249299 NADK2Q4G0N4 442 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 GXYLT1Q4G148 440 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 SLC35F1Q5T1Q4 408 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 LAIR2Q6ISS4 152 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 IGFN1Q86VF2 1251 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 CPOQ8IVL8 374 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 SLC37A3Q8NCC5 494 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 LSM14AQ8ND56 463 aaKnown RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 OR9K2Q8NGE7 335 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 PTP4A1Q93096 173 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 UBE2FQ969M7 185 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 TMEM45BQ96B21 275 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 SLC25A44Q96H78 314 aaPredicted RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 ZNF582Q96NG8 517 aaPredicted RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 SLX1AQ9BQ83 275 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 MRPL13Q9BYD1 178 aaKnown RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 DUSP21Q9H596 190 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 CALHM2Q9HA72 323 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 BCO1Q9HAY6 547 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 HINT3Q9NQE9 182 aaKnown RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 PARPBPQ9NWS1 579 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 KLHL13Q9P2N7 655 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 FKBP7Q9Y680 259 aa11.54□□□□□ -0.56
LSM8-201ENST00000249299 TNRC6AQ8NDV7 1962 aaKnown RBP11.54□□□□□ -0.56
LSM8-201ENST00000249299 ZNF716A6NP11 495 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 H0YC42 278 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 WDR1O75083 606 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 ENTPD6O75354 484 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 IGHG1P01857 330 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 LYNP07948 512 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 CRABP1P29762 137 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 ACVR1BP36896 505 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 CDKN2AP42771 156 aaKnown RBP11.53□□□□□ -0.56
LSM8-201ENST00000249299 SLC15A1P46059 708 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 RAB40BQ12829 278 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 POU4F2Q12837 409 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 CRMP1Q14194 572 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 KLHL22Q53GT1 634 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 MESTQ5EB52 335 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 THEM4Q5T1C6 240 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 DNM1P34Q6PK57 102 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 MEPCEQ7L2J0 689 aaKnown RBP11.53□□□□□ -0.56
LSM8-201ENST00000249299 GPAT4Q86UL3 456 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 ZBTB46Q86UZ6 589 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 EGFL6Q8IUX8 553 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 OR2T4Q8NH00 348 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 OR4K13Q8NH42 304 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 CNIH3Q8TBE1 160 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 MYDGFQ969H8 173 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 RASD2Q96D21 266 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 FKBP14Q9NWM8 211 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 PSORS1C1Q9UIG5 152 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 PCDHGB1Q9Y5G3 927 aa11.53□□□□□ -0.56
LSM8-201ENST00000249299 A0A1B0GTH9 108 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 CD8B2A6NJW9 211 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 ZNF726A6NNF4 738 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 ZNF814B7Z6K7 855 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 ARHGEF9O43307 516 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 ZNF432O94892 652 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 SLC2A10O95528 541 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 HLA-DOBP13765 273 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 SLC2A5P22732 501 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 PTGS2P35354 604 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 MTNR1AP48039 350 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 TDGF1P3P51864 188 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 ZNF133P52736 654 aaPredicted RBP11.52□□□□□ -0.57
LSM8-201ENST00000249299 CDH11P55287 796 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 TUBA4AP68366 448 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 SLC35A2P78381 396 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 SRYQ05066 204 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 RASGEF1BQ0VAM2 473 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 PON3Q15166 354 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 STK11Q15831 433 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 HIST3H3Q16695 136 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 EIF2S3LQ2VIR3 472 aaKnown RBP11.52□□□□□ -0.57
LSM8-201ENST00000249299 LCN1P1Q5VSP4 162 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms