RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TCF7L1Q9HCS4 588 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 PTTG3PQ9NZH4 202 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 ELF5Q9UKW6 265 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-202ENST00000244303 FOXJ3Q9UPW0 622 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 PRELID1Q9Y255 219 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 SLC6A5Q9Y345 797 aa13.07□□□□□ -0.32
HIF3A-202ENST00000244303 A0A1B0GTQ1 180 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 TEX51A0A1B0GUA7 166 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 LINC00862A6NCI5 91 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 A8MUA0 341 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 KHNYNO15037 678 aaKnown RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 GMFGO60234 142 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF217O75362 1048 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 SCO1O75880 301 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 UTS2O95399 124 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ABHD16AO95870 558 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ECDO95905 644 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 APEHP13798 732 aaKnown RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ADRA2CP18825 462 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 MAOBP27338 520 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 CD1CP29017 333 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 RPS27P42677 84 aaKnown RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 VEGFCP49767 419 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 SLC37A1P57057 533 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 TDGQ13569 410 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 TMEM69Q5SWH9 247 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 KCTD20Q7Z5Y7 419 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 CDC20BQ86Y33 519 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 DNAAF1Q8NEP3 725 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 PTPMT1Q8WUK0 201 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 FCAMRQ8WWV6 532 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF285Q96NJ3 590 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 OR10A4Q9H209 315 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 CLEC4MQ9H2X3 399 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 PNO1Q9NRX1 252 aaKnown RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF275Q9NSD4 429 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 EIF3KQ9UBQ5 218 aaKnown RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 GRHPRQ9UBQ7 328 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ALPK2Q86TB3 2170 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 KHDRBS3O75525 346 aaKnown RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 IL33O95760 270 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 RAF1P04049 648 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 TPOP07202 933 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 PSMB1P20618 241 aaKnown RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 DNASE1P24855 282 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 GFERP55789 205 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 SERTAD2Q14140 314 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 POU4F3Q15319 338 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF563Q8TA94 476 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 C1orf216Q8TAB5 229 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 LMX1AQ8TE12 382 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 DNAJA3Q96EY1 480 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 DPCDQ9BVM2 203 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-202ENST00000244303 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 HEXA-AS1Q9H8Q6 139 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 LAMP5Q9UJQ1 280 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 IKZF2Q9UKS7 526 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 NUP50Q9UKX7 468 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 CA14Q9ULX7 337 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 PLCL2Q9UPR0 1127 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 RNF215Q9Y6U7 377 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 LAMA1P25391 3075 aa13.06□□□□□ -0.32
HIF3A-202ENST00000244303 CACNA1CQ13936 2221 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 SPEGQ15772 3267 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 TXNDC12O95881 172 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 CALCBP10092 127 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 CDK2P24941 298 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 TACR3P29371 465 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 SELENOPP49908 381 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 ELOCQ15369 112 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 LGALSLQ3ZCW2 172 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-202ENST00000244303 FAAP20Q6NZ36 180 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 Q6ZTK2 550 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 PRR22Q8IZ63 422 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 OR6V1Q8N148 313 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 OR6N2Q8NGY6 317 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 HAVCR1Q96D42 359 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 TGM7Q96PF1 710 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 ELF4Q99607 663 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-202ENST00000244303 SLC38A3Q99624 504 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF436Q9C0F3 470 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-202ENST00000244303 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
HIF3A-202ENST00000244303 FKBP7Q9Y680 259 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 IGHV5-51A0A0C4DH38 117 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 A0A1W2PR77 199 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 METTL12A8MUP2 240 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 H3BSH0 61 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 SULT1B1O43704 296 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 AKR7A3O95154 331 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 GPANK1O95872 356 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 RAB40ALP0C0E4 278 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 CD27P26842 260 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 MAPK3P27361 379 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms