RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Lap3Q9CPY7 519 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cldn12Q9ET43 244 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Clec1bQ9JL99 229 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Prss47A0A0N4SVQ0 395 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm11758A2BEI6 360 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm11757A2BEI8 360 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Creg1O88668 220 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm5571P01639 130 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tyrp1P07147 537 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 H2-T3P14432 384 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tpi1P17751 299 aaKnown RBP10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 P20040 264 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 ScimpQ3UU41 150 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Xkr7Q5GH64 580 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 ApoolQ78IK4 265 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tas2r136Q7TQA8 305 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Prss34Q80UR4 318 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 SbsnQ8CIT9 700 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mboat2Q8R3I2 519 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Glb1lQ8VC60 646 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slc39a8Q91W10 462 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Phf1Q9Z1B8 559 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Smpd5D6MZJ6 483 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 AanatO88816 205 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Phxr1P15973 60 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pou3f4P62515 361 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Actc1P68033 377 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Acta1P68134 377 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 SctQ08535 133 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Bcl2a1cQ0P538 128 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tmem248Q3TBN1 314 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Apcdd1Q3U128 514 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slc35a1Q61420 336 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Usf2Q64705 346 aaKnown RBP10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tpgs2Q66JT5 296 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 1700001K19RikQ80ZT1 219 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Serpinb7Q9D695 380 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Arfgap1Q9EPJ9 414 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cts6Q9ET52 334 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Nxt1Q9QZV9 140 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ndufaf5A2APY7 343 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cyp2d37-psF6YKB5 150 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 LipiF6YQT7 476 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ms4a18J3QN01 344 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mcpt9O35164 246 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Kcns1O35173 497 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slc28a2O88627 660 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hoxa4P06798 285 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 TesP47226 423 aaKnown RBP10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ca10P61215 328 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cyb5d2Q5SSH8 263 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Fbxo34Q80XI1 695 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp947Q8BIQ6 437 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Adipor2Q8BQS5 386 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Dhcr24Q8VCH6 516 aaKnown RBP10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Sfxn5Q925N0 342 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hoga1Q9DCU9 321 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Bex3Q9WTZ9 124 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 LipgQ9WVG5 500 aa10.47□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm13283A0A087WPG5 182 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Skint7A7XV04 395 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tmem182B2RVY9 229 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 4930467E23RikD3Z1P8 350 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm15319E9Q637 350 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Fgf18O89101 207 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mmp12P34960 473 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 TaglnP37804 201 aaKnown RBP10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ndufb6Q3UIU2 128 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Eif4e2Q8BMB3 245 aaKnown RBP10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Hat1Q8BY71 416 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cep68Q8C0D9 733 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm21119Q8C646 350 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slc16a13Q8CE94 428 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1110Q8VG38 312 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1Q8VGI1 314 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cryzl1Q921W4 348 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ssna1Q9JJ94 119 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Clcf1Q9QZM3 225 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 ThadaA8C756 1938 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cd300cA2A7V7 229 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pusl1A2ADA5 291 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm11756A2BEJ1 356 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1224-ps1A3KGY4 311 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Grem1O70326 184 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pcp2P12660 120 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp60P16374 707 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slc38a8Q5HZH7 432 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Prkd2Q8BZ03 875 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zdhhc5Q8VDZ4 715 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tktl1Q99MX0 595 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mpc2Q9D023 127 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Exo1Q9QZ11 837 aa10.46□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm7697A0A0J9YUH2 350 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm9495A0A0J9YUZ3 350 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr1076A2AK60 313 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 AI182371A2AS37 356 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 GcatO88986 416 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 PnmtP40935 295 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Them4Q3UUI3 230 aa10.46□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Rpa2Q62193 270 aa10.46□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms