RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TTC23Q5W5X9 447 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 NIPAL3Q6P499 406 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 C3P1Q6ZMU1 363 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 Q6ZPB1 254 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-218ENST00000641491 AAED1Q7RTV5 226 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 DEPDC4Q8N2C3 294 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 OR6N1Q8NGY5 312 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 MOSPD2Q8NHP6 518 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 RND1Q92730 232 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 INTS12Q96CB8 462 aaKnown RBP11.56□□□□□ -0.56
PHGDH-218ENST00000641491 LRRC46Q96FV0 321 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 APOL4Q9BPW4 351 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 MCCC2Q9HCC0 563 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 ASB6Q9NWX5 421 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 CLCF1Q9UBD9 225 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 UPB1Q9UBR1 384 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 SEC14L4Q9UDX3 406 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 KLHL21Q9UJP4 597 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 CLEC4AQ9UMR7 237 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 GMPPBQ9Y5P6 360 aa11.56□□□□□ -0.56
PHGDH-218ENST00000641491 TLN1Q9Y490 2541 aaKnown RBP11.56□□□□□ -0.56
PHGDH-218ENST00000641491 MYO9AB2RTY4 2548 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 LRRK2Q5S007 2527 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 ZNF724A8MTY0 619 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 E9PLN8 166 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 DVL2O14641 736 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 KLF4O43474 513 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 IDH3BO43837 385 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 MITFO75030 526 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-218ENST00000641491 PPP1R3DO95685 299 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 CRHP06850 196 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 IFNGR1P15260 489 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 SDHAP31040 664 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 UQCRC1P31930 480 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 CA7P43166 264 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 BIDP55957 195 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 RPL27P61353 136 aaKnown RBP11.55□□□□□ -0.56
PHGDH-218ENST00000641491 RPS4XP62701 263 aaKnown RBP11.55□□□□□ -0.56
PHGDH-218ENST00000641491 CD47Q08722 323 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 NPRL3Q12980 569 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 PGGHGQ32M88 737 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 CARD17Q5XLA6 110 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 IZUMO2Q6UXV1 221 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 FGD2Q7Z6J4 655 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 ADCK1Q86TW2 530 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 DOLPP1Q86YN1 238 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 GCNT2Q8N0V5 402 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 KDM8Q8N371 416 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 GPR137CQ8N3F9 429 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 DHRSXQ8N5I4 330 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 SETD9Q8NE22 299 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 FNDC8Q8TC99 324 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 ZNF566Q969W8 418 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 APH1AQ96BI3 265 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 VKORC1Q9BQB6 163 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 SFXN3Q9BWM7 321 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 TOR3AQ9H497 397 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 H2AFY2Q9P0M6 372 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-218ENST00000641491 PROCRQ9UNN8 238 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 ZNF835Q9Y2P0 537 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 IER3IP1Q9Y5U9 82 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 EML6Q6ZMW3 1958 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
PHGDH-218ENST00000641491 TEX13CA0A0J9YWL9 993 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 MBD3L4A6NDZ8 208 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 MBD3L3A6NE82 208 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 MBD3L5A6NJ08 208 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 SNTNA6NMZ2 147 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 IMPA2O14732 288 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 ARHGEF9O43307 516 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 AQP8O94778 261 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 OPRM1P35372 400 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 TIMP3P35625 211 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 CSNK1A1P48729 337 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 SLC16A1P53985 500 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 PMPCAQ10713 525 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 KRR1Q13601 381 aaKnown RBP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 MELKQ14680 651 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 GINS1Q14691 196 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 SLC17A1Q14916 467 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 SNAPC1Q16533 368 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 ACKR1Q16570 336 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 RIPPLY2Q5TAB7 128 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 FAM214BQ7L5A3 538 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 FJX1Q86VR8 437 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 TUSC5Q8IXB3 177 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 C9orf106Q8NAJ2 232 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 OR6K3Q8NGY3 331 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 MBD3L2Q8NHZ7 208 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 FAM81AQ8TBF8 368 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 RBP7Q96R05 134 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 GPX7Q96SL4 187 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-218ENST00000641491 GPA33Q99795 319 aa11.54□□□□□ -0.56
PHGDH-218ENST00000641491 TTYH2Q9BSA4 534 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms