RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 CRYAAP02489 173 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 HLA-DOBP13765 273 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 AHCYP23526 432 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 TUBA1BP68363 451 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 TUBA4AP68366 448 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 CARD17Q5XLA6 110 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 ERICH5Q6P6B1 374 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 DNM1P46Q6ZS02 220 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 TUBA1AQ71U36 451 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 PXKQ7Z7A4 578 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 RBM45Q8IUH3 476 aaKnown RBP21.97■■□□□ 1.11
VEGFA-232ENST00000640653 C20orf196Q8IYI0 205 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 FAM169BQ8N8A8 192 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 OR4D11Q8NGI4 311 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 PROX1Q92786 737 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 MPP4Q96JB8 637 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 LRR1Q96L50 414 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 PCDHAC1Q9H158 963 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 GID8Q9NWU2 228 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 SLC7A7Q9UM01 511 aa21.97■■□□□ 1.11
VEGFA-232ENST00000640653 ZNF726A6NNF4 738 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 ZNF99A8MXY4 864 aaPredicted RBP21.96■■□□□ 1.11
VEGFA-232ENST00000640653 H7C417 338 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 M0R3G1 203 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 OR6A2O95222 327 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 PPP2R2BQ00005 443 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 GUCY1A3Q02108 690 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 SNX32Q86XE0 403 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 CCDC36Q8IYA8 594 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 RHNO1Q9BSD3 238 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 EMC6Q9BV81 110 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 CCDC134Q9H6E4 229 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 MED29Q9NX70 200 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 BAG5Q9UL15 447 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 PMF1-BGLAPU3KQ54 211 aa21.96■■□□□ 1.11
VEGFA-232ENST00000640653 NIPBLQ6KC79 2804 aaeCLIP21.96■■□□□ 1.112e-6■■□□□ 11.5
VEGFA-232ENST00000640653 SLC35F4A4IF30 521 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 IGLV1-44P01699 117 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 CECR9P0C854 216 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 ADORA3P0DMS8 318 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 DSCR9P59020 149 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 WDR88Q6ZMY6 472 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 ZNF837Q96EG3 531 aaPredicted RBP21.95■■□□□ 1.1
VEGFA-232ENST00000640653 SLC19A3Q9BZV2 496 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 CAPN7Q9Y6W3 813 aa21.95■■□□□ 1.1
VEGFA-232ENST00000640653 LOC100653049A0A140TA62 436 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 SERPINI2O75830 405 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 KRT34O76011 436 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 LYPD3O95274 346 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 IFNA14P01570 189 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 IGKV3-15P01624 115 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 THY1P04216 161 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 CBR1P16152 277 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 CRYBA2P53672 197 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 NAAAQ02083 359 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 ZNF74Q16587 644 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 CLEC2AQ6UVW9 174 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 MAPK1IP1LQ8NDC0 245 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 TXNDC15Q96J42 360 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 NANSQ9NR45 359 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 SH3GLB1Q9Y371 365 aa21.94■■□□□ 1.1
VEGFA-232ENST00000640653 C11orf98E9PRG8 122 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 SLC22A2O15244 555 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 CH25HO95992 272 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 PCSK6P29122 969 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 ARR3P36575 388 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 CAPZA2P47755 286 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 CAMK2DQ13557 499 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 PHYHD1Q5SRE7 291 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 NHLRC1Q6VVB1 395 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 CARM1Q86X55 608 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 OR4F15Q8NGB8 312 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 OR6N1Q8NGY5 312 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 FBXO17Q96EF6 278 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 ZNF583Q96ND8 569 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 ULBP2Q9BZM5 246 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 MED4Q9NPJ6 270 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 CA10Q9NS85 328 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 ZNF229Q9UJW7 825 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 USP22Q9UPT9 525 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 POFUT2Q9Y2G5 429 aa21.93■■□□□ 1.1
VEGFA-232ENST00000640653 KPNA4O00629 521 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-232ENST00000640653 HIST1H2ABP04908 130 aa21.92■■□□□ 1.1
VEGFA-232ENST00000640653 ZP4Q12836 540 aa21.92■■□□□ 1.1
VEGFA-232ENST00000640653 HIST3H2AQ7L7L0 130 aa21.92■■□□□ 1.1
VEGFA-232ENST00000640653 TSPYL5Q86VY4 417 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-232ENST00000640653 C10orf82Q8WW14 230 aa21.92■■□□□ 1.1
VEGFA-232ENST00000640653 HIST1H2ACQ93077 130 aa21.92■■□□□ 1.1
VEGFA-232ENST00000640653 ZNF426Q9BUY5 554 aa21.92■■□□□ 1.1
VEGFA-232ENST00000640653 POLR2J2Q9GZM3 115 aaKnown RBP21.92■■□□□ 1.1
VEGFA-232ENST00000640653 POLR2J3Q9H1A7 115 aaKnown RBP21.92■■□□□ 1.1
VEGFA-232ENST00000640653 FAM220BPB1ANY3 271 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 INAFM1C9JVW0 142 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 SEC14L2O76054 403 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 TP53P04637 393 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-232ENST00000640653 CSNK1A1P48729 337 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 IDH3GP51553 393 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-232ENST00000640653 BIDP55957 195 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 TAS2R41P59536 307 aa21.91■■□□□ 1.1
VEGFA-232ENST00000640653 SNRPD2P62316 118 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms