RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 NANOGP8Q6NSW7 305 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 TUBA1AQ71U36 451 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 HIST3H2AQ7L7L0 130 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 PXKQ7Z7A4 578 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 TMEM123Q8N131 208 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 PCYOX1LQ8NBM8 494 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 GPR32P1Q8NGA4 272 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 OR4F15Q8NGB8 312 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 OR8J3Q8NGG0 315 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 HIST1H2ACQ93077 130 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 MPP4Q96JB8 637 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 LRR1Q96L50 414 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 MOGAT1Q96PD6 335 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 WFDC6Q9BQY6 131 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 NANOGQ9H9S0 305 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 FGFR1OP2Q9NVK5 253 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 GID8Q9NWU2 228 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 CRNNQ9UBG3 495 aaPredicted RBP16.52■□□□□ 0.24
CLN6-221ENST00000637494 FBXO9Q9UK97 447 aaPredicted RBP16.52■□□□□ 0.24
CLN6-221ENST00000637494 USP22Q9UPT9 525 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 POFUT2Q9Y2G5 429 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 FKBP7Q9Y680 259 aa16.52■□□□□ 0.24
CLN6-221ENST00000637494 CADP27708 2225 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 NIPBLQ6KC79 2804 aaeCLIP16.51■□□□□ 0.23
CLN6-221ENST00000637494 SLC35F4A4IF30 521 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 FBP2O00757 339 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 PLPP3O14495 311 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 MRASO14807 208 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 SERPINI2O75830 405 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 IFNA14P01570 189 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 CECR9P0C854 216 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 CBR1P16152 277 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 EFNA4P52798 201 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 ERICH5Q6P6B1 374 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 DNM1P46Q6ZS02 220 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 C20orf196Q8IYI0 205 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 IL17RDQ8NFM7 739 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 ADAMTS16Q8TE57 1224 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 NANOS1Q8WY41 292 aaKnown RBP16.51■□□□□ 0.23
CLN6-221ENST00000637494 FAM168AQ92567 244 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 LRRC58Q96CX6 371 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 EMC6Q9BV81 110 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 ULBP2Q9BZM5 246 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 CA10Q9NS85 328 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 BAG5Q9UL15 447 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 SLC7A7Q9UM01 511 aa16.51■□□□□ 0.23
CLN6-221ENST00000637494 C11orf98E9PRG8 122 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 ENTPD5O75356 428 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 PDE5AO76074 875 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 HPRP00739 348 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 UMPSP11172 480 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 HLA-DOBP13765 273 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 SLC25A16P16260 332 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 SERPINF1P36955 418 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 NPRL3Q12980 569 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 KLF10Q13118 480 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 VHLLQ6RSH7 139 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 LINC00114Q6XXX2 140 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 CCDC80Q76M96 950 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 TAMM41Q96BW9 452 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 SLC19A3Q9BZV2 496 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 NELFAQ9H3P2 528 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 NANSQ9NR45 359 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 MED29Q9NX70 200 aa16.5■□□□□ 0.23
CLN6-221ENST00000637494 B9A039 149 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 LRRN3E7EW58 273 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 TLX2O43763 284 aaPredicted RBP16.49■□□□□ 0.23
CLN6-221ENST00000637494 CH25HO95992 272 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 IGKV3-15P01624 115 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 IGLV1-44P01699 117 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 CSNK1A1P48729 337 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 IDH3GP51553 393 aaPredicted RBP16.49■□□□□ 0.23
CLN6-221ENST00000637494 CAMK2DQ13557 499 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 NPTX1Q15818 432 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 RABL3Q5HYI8 236 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 REP15Q6BDI9 236 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 SLC46A3Q7Z3Q1 461 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 RBM45Q8IUH3 476 aaKnown RBP16.49■□□□□ 0.23
CLN6-221ENST00000637494 HTRA1Q92743 480 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 TXNDC15Q96J42 360 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 SH3GLB1Q9Y371 365 aa16.49■□□□□ 0.23
CLN6-221ENST00000637494 HEATR1Q9H583 2144 aaKnown RBP16.48■□□□□ 0.23
CLN6-221ENST00000637494 IGHV4-30-2A0A087WSY4 118 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 KPNA4O00629 521 aaPredicted RBP16.48■□□□□ 0.23
CLN6-221ENST00000637494 RNF13O43567 381 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 F12P00748 615 aaPredicted RBP16.48■□□□□ 0.23
CLN6-221ENST00000637494 ERCC1P07992 297 aaPredicted RBP16.48■□□□□ 0.23
CLN6-221ENST00000637494 CD79AP11912 226 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 BIDP55957 195 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 SF3A3Q12874 501 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLN6-221ENST00000637494 ZNF74Q16587 644 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 SWI5Q1ZZU3 235 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 ZNF813Q6ZN06 617 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 ZNF525Q8N782 197 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 NUP37Q8NFH4 326 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 OR10H5Q8NGA6 315 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 VRK1Q99986 396 aaPredicted RBP16.48■□□□□ 0.23
CLN6-221ENST00000637494 PCDHAC1Q9H158 963 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 SAR1AQ9NR31 198 aa16.48■□□□□ 0.23
CLN6-221ENST00000637494 ZNF229Q9UJW7 825 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms