RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CCDC167Q9P0B6 97 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 KCNS2Q9ULS6 477 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 ANK2Q01484 3957 aa15.99■□□□□ 0.15
CLN6-220ENST00000637450 A0A0B4J2E0 115 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 A0A1B0GX12 115 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 hCG_2039718K7EN88 272 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 M0R3G1 203 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 TPST2O60704 377 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 STAMBPO95630 424 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 HPRP00739 348 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 BGLAPP02818 100 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 HLA-DOBP13765 273 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 ZNF23P17027 643 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 GPX2P18283 190 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 IL1RL1Q01638 556 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 OR1Q1Q15612 314 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 FAM120AOSQ5T036 256 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 MALRD1Q5VYJ5 2156 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 UEVLDQ8IX04 471 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 C20orf196Q8IYI0 205 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 LRR1Q96L50 414 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 WFDC6Q9BQY6 131 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 CCDC28BQ9BUN5 200 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 BPESC1Q9GZL8 116 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 IKZF5Q9H5V7 419 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 TMEM38AQ9H6F2 299 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 TMEM27Q9HBJ8 222 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 B3GNT2Q9NY97 397 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 TESQ9UGI8 421 aaKnown RBP15.98■□□□□ 0.15
CLN6-220ENST00000637450 USP22Q9UPT9 525 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 CORINQ9Y5Q5 1042 aa15.98■□□□□ 0.15
CLN6-220ENST00000637450 PRORSD1PA6NEY8 169 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 ERLIN1O75477 346 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 NQO1P15559 274 aaKnown RBP15.97■□□□□ 0.15
CLN6-220ENST00000637450 SLC6A2P23975 617 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 GIFP27352 417 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 CAPZA2P47755 286 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 NPRL3Q12980 569 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 SCARB2Q14108 478 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 ADRM1Q16186 407 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 CARD17Q5XLA6 110 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 SPATA21Q7Z572 469 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 ZCCHC24Q8N2G6 241 aaKnown RBP15.97■□□□□ 0.15
CLN6-220ENST00000637450 SVOPLQ8N434 492 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 SCAIQ8N9R8 606 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 BHLHE22Q8NFJ8 381 aaPredicted RBP15.97■□□□□ 0.15
CLN6-220ENST00000637450 NEU4Q8WWR8 484 aaPredicted RBP15.97■□□□□ 0.15
CLN6-220ENST00000637450 TXNDC15Q96J42 360 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 ZNF607Q96SK3 696 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 EPYCQ99645 322 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 EMC6Q9BV81 110 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 CHODLQ9H9P2 273 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 SLCO1B3Q9NPD5 702 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 SELENONQ9NZV5 590 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 CORO2BQ9UQ03 480 aa15.97■□□□□ 0.15
CLN6-220ENST00000637450 SERPINB7O75635 380 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 SEC14L2O76054 403 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 TGFAP01135 160 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 IGFBP1P08833 259 aaPredicted RBP15.96■□□□□ 0.15
CLN6-220ENST00000637450 DAOP14920 347 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 SRD5A1P18405 259 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 RGS8P57771 180 aaPredicted RBP15.96■□□□□ 0.15
CLN6-220ENST00000637450 NCALDP61601 193 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 DAG1Q14118 895 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 AGBL2Q5U5Z8 902 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 ZNF627Q7L945 461 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 RNF217Q8TC41 542 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 MOGAT1Q96PD6 335 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 ASPNQ9BXN1 380 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 EVA1AQ9H8M9 152 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 NOX3Q9HBY0 568 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 MED29Q9NX70 200 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 MRPL39Q9NYK5 338 aaKnown RBP15.96■□□□□ 0.15
CLN6-220ENST00000637450 NOX1Q9Y5S8 564 aa15.96■□□□□ 0.15
CLN6-220ENST00000637450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■■□□□ 12.3
CLN6-220ENST00000637450 EVPLLA8MZ36 301 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 HLA-HP01893 362 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 ERCC1P07992 297 aaPredicted RBP15.95■□□□□ 0.14
CLN6-220ENST00000637450 NR4A1P22736 598 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 AQP5P55064 265 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 CDH12P55289 794 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 POU3F1Q03052 451 aaPredicted RBP15.95■□□□□ 0.14
CLN6-220ENST00000637450 PUDPQ08623 228 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 PMS2P3Q13401 168 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 KRTAP24-1Q3LI83 254 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 AGKQ53H12 422 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 DLEU7Q6UYE1 221 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 IL17RELQ6ZVW7 336 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 ARMC8Q8IUR7 673 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 WDFY1Q8IWB7 410 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 ZNF786Q8N393 782 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 HIPK4Q8NE63 616 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 LRRC8CQ8TDW0 803 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 CKAP2Q8WWK9 683 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 ZNF75AQ96N20 296 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 SOX7Q9BT81 388 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 TMEM43Q9BTV4 400 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 SLC13A4Q9UKG4 626 aa15.95■□□□□ 0.14
CLN6-220ENST00000637450 SH3PXD2BA1X283 911 aa15.94■□□□□ 0.14
CLN6-220ENST00000637450 PLPP3O14495 311 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms