RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ARPC1BO15143 372 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 OR6A2O95222 327 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 PDGFBP01127 241 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 HOXC4P09017 264 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 GKN3PP0CG01 181 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CPN1P15169 458 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 PPP3CBP16298 524 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 GDI1P31150 447 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 AKT2P31751 481 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 VIPR2P41587 438 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CASP6P55212 293 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RAB38P57729 211 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ERVFC1P60507 584 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 GGTLC2Q14390 218 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF267Q14586 743 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RBMS2Q15434 407 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 MAJINQ3KP22 176 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 TCTE1Q5JU00 501 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 AGBL4Q5VU57 503 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RD3Q7Z3Z2 195 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CSNK1A1LQ8N752 337 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CYB561A3Q8NBI2 242 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 OR2T4Q8NH00 348 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 OR4K13Q8NH42 304 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 PFN4Q8NHR9 129 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 SPATA3Q8NHX4 192 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 SMAP2Q8WU79 429 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CNOT9Q92600 299 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RBPMSQ93062 196 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ELMOD3Q96FG2 381 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 DUSP15Q9H1R2 295 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 OR10A4Q9H209 315 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 METTL17Q9H7H0 456 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 CRLF2Q9HC73 371 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 MEPEQ9NQ76 525 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 C12orf4Q9NQ89 552 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 TAS2R5Q9NYW4 299 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ACTR10Q9NZ32 417 aa3.65□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF223Q9UK11 482 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 PPIEQ9UNP9 301 aaKnown RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 RPH3AQ9Y2J0 694 aaPredicted RBP3.65□□□□□ -1.83
SCN1A-214ENST00000637038 A0A0B4J2E0 115 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 A0A1B0GX12 115 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 hCG_1807616A0A1W2PRN6 198 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PRSS38A1L453 326 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TRIM77I1YAP6 450 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 XKRYO14609 159 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CDC42EP2O14613 210 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ST8SIA5O15466 376 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 BRINP1O60477 761 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PRAMEF2O60811 474 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SC5DO75845 299 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 GLCEO94923 617 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 EPPINO95925 133 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CSTAP01040 98 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SLC35E2P0CK97 266 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 RNH1P13489 461 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SRMP19623 302 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 MAKP20794 623 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 DRD5P21918 477 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 RPS4Y1P22090 263 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PTGER1P34995 402 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 KLF9Q13886 244 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF124Q15973 351 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 Q499Y3 187 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 AARDQ4LEZ3 155 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OLFML2AQ68BL7 652 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SFRP4Q6FHJ7 346 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 FIGNL1Q6PIW4 674 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 FAM111BQ6SJ93 734 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ENPP7Q6UWV6 458 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 B3GLCTQ6Y288 498 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 ADGRG3Q86Y34 549 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 PDZD9Q8IXQ8 264 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR5AK2Q8NH90 309 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 OR14A16Q8NHC5 309 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SYNPRQ8TBG9 265 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 GPR148Q8TDV2 347 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TSEN15Q8WW01 171 aaKnown RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SENP5Q96HI0 755 aaPredicted RBP3.64□□□□□ -1.83
SCN1A-214ENST00000637038 DGAT2Q96PD7 388 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SORCS2Q96PQ0 1159 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TNFRSF13CQ96RJ3 184 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 WFDC6Q9BQY6 131 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 RBCK1Q9BYM8 510 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 HRASLSQ9HDD0 168 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 DLL4Q9NR61 685 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SERTAD3Q9UJW9 196 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 POMT2Q9UKY4 750 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 SRPK3Q9UPE1 567 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 NTNG1Q9Y2I2 539 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 IER3IP1Q9Y5U9 82 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 CACNA1IQ9P0X4 2223 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 A0A0J9YY10 115 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM212A6NML5 194 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 IFITM5A6NNB3 132 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 F5H5P2 479 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 J3QRE1 110 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 IMPA2O14732 288 aa3.64□□□□□ -1.83
SCN1A-214ENST00000637038 TNFRSF10CO14798 259 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms