RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CAMK2BQ13554 666 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 C10orf62Q5T681 223 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 FAM199XQ6PEV8 388 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 CORO6Q6QEF8 472 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 PGAP1Q75T13 922 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 CCDC28AQ8IWP9 274 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 RASD2Q96D21 266 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 SLC25A31Q9H0C2 315 aa16.52■□□□□ 0.24
CACNA1A-227ENST00000636549 ZNF74Q16587 644 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 LPCAT3Q6P1A2 487 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 OR4M1Q8NGD0 313 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 OR52D1Q9H346 318 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 C1orf198Q9H425 327 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 CCM2LQ9NUG4 571 aaPredicted RBP16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 V9GY05 133 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 OR6C76A6NM76 312 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 LINC01565O15544 149 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 PMP22Q01453 160 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 AKR1E2Q96JD6 320 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 THAP7Q9BT49 309 aaPredicted RBP16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 FUNDC2Q9BWH2 189 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 FGF21Q9NSA1 209 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 PPT2Q9UMR5 302 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 HRH3Q9Y5N1 445 aa16.52■□□□□ 0.23
CACNA1A-227ENST00000636549 FADS1O60427 444 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 CCR7P32248 378 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 CATR1Q13166 79 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 GALEQ14376 348 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 BPIFB2Q8N4F0 458 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 OR8U1Q8NH10 309 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 IGSF5Q9NSI5 407 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 STYXL1Q9Y6J8 313 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 ARL2-SNX15V9GYD0 113 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 SPINT2O43291 252 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 GGT1P19440 569 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 UBE2KP61086 200 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 TIGD3Q6B0B8 471 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 SPNS3Q6ZMD2 512 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 OR51D1Q8NGF3 324 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 ZFAND1Q8TCF1 268 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 TMEM43Q9BTV4 400 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 EMC7Q9NPA0 242 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 PLA2G3Q9NZ20 509 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 FOXE1O00358 373 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 NPC1O15118 1278 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 THBS3P49746 956 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 CCBE1Q6UXH8 406 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 PLPP7Q8NBV4 271 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 COQ10AQ96MF6 247 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 SLC30A3Q99726 388 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 C6orf106Q9H6K1 298 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 MEIOCA2RUB1 952 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 SMLR1H3BR10 107 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 I6L893 689 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 NUDT1P36639 197 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 S100A7AQ86SG5 101 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 FAM71CQ8NEG0 241 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 GGHQ92820 318 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 APH1AQ96BI3 265 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 SPATA31D1Q6ZQQ2 1576 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 TAGLNQ01995 201 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 DPPA4Q7L190 304 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 SLC12A9Q9BXP2 914 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 FBXL2Q9UKC9 423 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 PROCRQ9UNN8 238 aa16.51■□□□□ 0.23
CACNA1A-227ENST00000636549 NPPAP01160 153 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 PCSK6P29122 969 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 ZIC5Q96T25 663 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 NMNAT3Q96T66 252 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 SPHK1Q9NYA1 384 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 RNF212BA8MTL3 300 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 IL2RAP01589 272 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 S100A7P31151 101 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 CD68P34810 354 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 GIPRP48546 466 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 CATSPERDQ86XM0 798 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 ZUFSPQ96AP4 578 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 FAXDC2Q96IV6 333 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 KLF16Q9BXK1 252 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 LPAR2Q9HBW0 351 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 SELENOFO60613 162 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 TAS2R30P59541 319 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 OR2T35Q8NGX2 323 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 RHEBL1Q8TAI7 183 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 TMEM230Q96A57 120 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 CNTNAP3Q9BZ76 1288 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 PGAP2Q9UHJ9 254 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 SOBPA7XYQ1 873 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 PPIHO43447 177 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 ZNF181Q2M3W8 571 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 H2BFWTQ7Z2G1 175 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 ABHD11Q8NFV4 315 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 CD200R1Q8TD46 325 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 RNF170Q96K19 258 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 RIMS4Q9H426 269 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 ZNF785A8K8V0 405 aa16.5■□□□□ 0.23
CACNA1A-227ENST00000636549 IGHV3-13P01766 116 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms