RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 PDE5AO76074 875 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 OPN1SWP03999 348 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 IL2RGP31785 369 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 SH3BGRP55822 239 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 STX1BP61266 288 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 GGTLC2Q14390 218 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 CARD17Q5XLA6 110 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 FAM91A1Q658Y4 838 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 CYB5R2Q6BCY4 276 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 PODNL1Q6PEZ8 512 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 DNAJA4Q8WW22 397 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 THOC1Q96FV9 657 aaKnown RBP11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 ARHGDIGQ99819 225 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 BPESC1Q9GZL8 116 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 RPS6KB2Q9UBS0 482 aa11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 TESQ9UGI8 421 aaKnown RBP11.69□□□□□ -0.54
SOX2-OT-241ENST00000626948 RNF212BA8MTL3 300 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 ZNF99A8MXY4 864 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 PLPP3O14495 311 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 PHF1O43189 567 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 HLA-HP01893 362 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 CSF3P09919 207 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 ZNF14P17017 642 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 PPOXP50336 477 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 PDLIM4P50479 330 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 GZMMP51124 257 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 ATP4BP51164 291 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 RGS8P57771 180 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 MTPNP58546 118 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 SNRPD2P62316 118 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 POU3F1Q03052 451 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 NPRL3Q12980 569 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 KRTAP24-1Q3LI83 254 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 ZNF627Q7L945 461 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 NET1Q7Z628 596 aaPredicted RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 CDK20Q8IZL9 346 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 GPR137CQ8N3F9 429 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 SVOPLQ8N434 492 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 OR6T1Q8NGN1 323 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 OR6S1Q8NH40 331 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 LRRC8CQ8TDW0 803 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 SLC47A1Q96FL8 570 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 ATP6V1G3Q96LB4 118 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 ZNF442Q9H7R0 627 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 MRPL39Q9NYK5 338 aaKnown RBP11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 CDC42EP3Q9UKI2 254 aa11.68□□□□□ -0.54
SOX2-OT-241ENST00000626948 LOC390937A0A1W2PQ73 354 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 LRP5LA4QPB2 252 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 LYNX1G3V0Z9 82 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 hCG_2039718K7EN88 272 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 LMX1BO60663 402 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 LILRA1O75019 489 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 STAMBPO95630 424 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 LYNX1P0DP58 116 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 ZNF35P13682 527 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 CD247P20963 164 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 GTF2E2P29084 291 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 CAMK2DQ13557 499 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 C1DQ13901 141 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 SQLEQ14534 574 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 MFSD13AQ14CX5 517 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 C5orf46Q6UWT4 87 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 SLC46A3Q7Z3Q1 461 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 ARMC8Q8IUR7 673 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 ZNF584Q8IVC4 421 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 UEVLDQ8IX04 471 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 DPP10Q8N608 796 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 LRRC17Q8N6Y2 441 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 HIPK4Q8NE63 616 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 PIK3C3Q8NEB9 887 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 OR4F15Q8NGB8 312 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 LRR1Q96L50 414 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 ANKRD27Q96NW4 1050 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 TAS2R5Q9NYW4 299 aa11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-241ENST00000626948 SH3PXD2BA1X283 911 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 M0QX08 132 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 NDUFS8O00217 210 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 PATE4P0C8F1 98 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 BMP4P12644 408 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 B4GALT1P15291 398 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 PPIBP23284 216 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 SLC6A2P23975 617 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 GIFP27352 417 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 ARR3P36575 388 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 PIGFQ07326 219 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 PUDPQ08623 228 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 TRIP10Q15642 601 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 CARTPTQ16568 116 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 KRT80Q6KB66 452 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 SPATA21Q7Z572 469 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 LRP11Q86VZ4 500 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 CARM1Q86X55 608 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 KRT73Q86Y46 540 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 SCAIQ8N9R8 606 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 TAMM41Q96BW9 452 aa11.66□□□□□ -0.54
SOX2-OT-241ENST00000626948 MCHR1Q99705 422 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms