RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PRSS44E7EML9 344 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 BCL2L11O43521 198 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 LATO43561 262 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 CD3DP04234 171 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 CSRP1P21291 193 aaKnown RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 CSF2RBP32927 897 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 ZNF684Q5T5D7 378 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 SLC43A2Q8N370 569 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 MFSD9Q8NBP5 474 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 NPEPL1Q8NDH3 523 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 OR4K14Q8NGD5 310 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 OR8S1Q8NH09 359 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 DVL3Q92997 716 aaPredicted RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 Q96M85 177 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 ZNF426Q9BUY5 554 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 FAM117AQ9C073 453 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 C1orf198Q9H425 327 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 A0A0C4DFX4 3053 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 TMEM218A2RU14 115 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 PAK4O96013 591 aaPredicted RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 MAS1P04201 325 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 ANXA2P07355 339 aaKnown RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 EPCAMP16422 314 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 MEOX2P50222 304 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 EFNB2P52799 333 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 TNFRSF17Q02223 184 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 ZNF528Q3MIS6 628 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 CNKSR3Q6P9H4 555 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 ZNF227Q86WZ6 799 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 SVBPQ8N300 66 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 TMIEQ8NEW7 156 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 STEAP2Q8NFT2 490 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 OR1S2Q8NGQ3 325 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 VRK1Q99986 396 aaPredicted RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 ADAT1Q9BUB4 502 aaKnown RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 ZNF471Q9BX82 626 aaPredicted RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 CRISPLD2Q9H0B8 497 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 ALX4Q9H161 411 aaPredicted RBP12.88□□□□□ -0.35
LDB3-209ENST00000623056 BIN3Q9NQY0 253 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 SPHK1Q9NYA1 384 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 CTSFQ9UBX1 484 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 PCDHB10Q9UN67 800 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 ENTPD2Q9Y5L3 495 aa12.88□□□□□ -0.35
LDB3-209ENST00000623056 TRAV8-7A0A075B6U6 113 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR6C68A6NDL8 312 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR5H14A6NHG9 310 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 H0YC42 278 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 LILRB3O75022 631 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ADAM11O75078 769 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 CTAG2O75638 210 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 SLC25A12O75746 678 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 PMS2P2O95744 297 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 CD8AP01732 235 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 APOC1P02654 83 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ITGB2P05107 769 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR4E1P0C645 316 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ZNF888P0CJ79 500 aaPredicted RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR8G3PP0DMU2 310 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 CSF2RAP15509 400 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ADCYAP1P18509 176 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 PEBP1P30086 187 aaKnown RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 AKR1C2P52895 323 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 AKR1C1Q04828 323 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 MESP2Q0VG99 397 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ZNF345Q14585 488 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ZNF77Q15935 545 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 MANEAQ5SRI9 462 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 NKAIN2Q5VXU1 208 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 GLT8D1Q68CQ7 371 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ANKRD16Q6P6B7 361 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR52E1Q8NGJ3 308 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR5AK2Q8NH90 309 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR8D1Q8WZ84 308 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 FGF13Q92913 245 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 TOX2Q96NM4 488 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 GPN3Q9UHW5 284 aaPredicted RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 TNFSF18Q9UNG2 199 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 C19orf53Q9UNZ5 99 aaPredicted RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 FAM171A2A8MVW0 826 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 GNB5O14775 395 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 PRICKLE3O43900 615 aaPredicted RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR2F2O95006 317 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 ACRP10323 421 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 BDKRB2P30411 391 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 RORAP35398 523 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 RPL4P36578 427 aaKnown RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 RBM34P42696 430 aaKnown RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 HTRA4P83105 476 aaPredicted RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 ID2Q02363 134 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 OR2F1Q13607 317 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 PAN3Q58A45 887 aaKnown RBP12.87□□□□□ -0.35
LDB3-209ENST00000623056 BEX5Q5H9J7 111 aa12.87□□□□□ -0.35
LDB3-209ENST00000623056 FHL5Q5TD97 284 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms