RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 NCK1P16333 377 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 ZNF43P17038 809 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 CDKN1AP38936 164 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 CLDN17P56750 224 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 TRIM25Q14258 630 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 NPTX1Q15818 432 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 NRF1Q16656 503 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 HIKESHIQ53FT3 197 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 CYBRD1Q53TN4 286 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 MTX3Q5HYI7 312 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 FKBP9P1Q75LS8 142 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 RANBP3LQ86VV4 465 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 OR4D11Q8NGI4 311 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 OR6T1Q8NGN1 323 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 BOD1Q96IK1 185 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 RADILQ96JH8 1075 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 OXGR1Q96P68 337 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 ALKBH3Q96Q83 286 aaPredicted RBP15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 MCHR1Q99705 422 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 BDH2Q9BUT1 245 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 SELENONQ9NZV5 590 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 USP22Q9UPT9 525 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 MGAT4BQ9UQ53 548 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 AMDHD2Q9Y303 409 aa15.72■□□□□ 0.11
SCAMP4-213ENST00000621748 ZNF432O94892 652 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 SERPINA1P01009 418 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 C8BP07358 591 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 IFNA8P32881 189 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 MSX2P35548 267 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 CRYBA2P53672 197 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 TRAP1Q12931 704 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 SLC22A25Q6T423 547 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 H1FNTQ75WM6 255 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 ABHD12BQ7Z5M8 362 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 DTX2Q86UW9 622 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 RBM45Q8IUH3 476 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 GTPBP3Q969Y2 492 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 TAMM41Q96BW9 452 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 ASB9Q96DX5 294 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 CLPTM1LQ96KA5 538 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 TRAF4Q9BUZ4 470 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 CADM1Q9BY67 442 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 GORASP2Q9H8Y8 452 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 ACTR3BQ9P1U1 418 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 B3GALT5Q9Y2C3 310 aa15.71■□□□□ 0.11
SCAMP4-213ENST00000621748 OR6C65A6NJZ3 312 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 ZNF587BE7ETH6 402 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 LRRN3E7EW58 273 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 MS4A18H0YCH9 400 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 SMAD7O15105 426 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 FMO6PO60774 539 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 HPRP00739 348 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 BGLAPP02818 100 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 HOXB4P17483 251 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 CD247P20963 164 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 PRPS1P60891 318 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 MS4A18Q3C1V0 323 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 LINC00114Q6XXX2 140 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 B3GLCTQ6Y288 498 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 TSPYL5Q86VY4 417 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 OR1K1Q8NGR3 316 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 OR6S1Q8NH40 331 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 BCL2L2Q92843 193 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 SLC41A3Q96GZ6 507 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 MOGAT1Q96PD6 335 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 LINC00470Q9BZP3 86 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 PCDHAC1Q9H158 963 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 RCE1Q9Y256 329 aa15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 NSD1Q96L73 2696 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-213ENST00000621748 LOC102725191A0A1B0GVB3 256 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 ERICH4A6NGS2 130 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 CPSF4LA6NMK7 179 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 ARPC2O15144 300 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 TRAF3IP2O43734 574 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 NDUFS7O75251 213 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 LY6G6DO95868 133 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 THY1P04216 161 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 HLA-DOBP13765 273 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 SELENOWP63302 87 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 ROR2Q01974 943 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 C1DQ13901 141 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 FLOT2Q14254 428 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 TBRG1Q3YBR2 411 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 ENTPD8Q5MY95 495 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 SWT1Q5T5J6 900 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 ZNF613Q6PF04 617 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 CLEC9AQ6UXN8 241 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 WDR88Q6ZMY6 472 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 C10orf67Q8IYJ2 551 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 ADPRHL1Q8NDY3 354 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 VANGL1Q8TAA9 524 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 TRMT61AQ96FX7 289 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 POM121Q96HA1 1249 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 EPYCQ99645 322 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 TMEM43Q9BTV4 400 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 GRIP2Q9C0E4 1043 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 FAIMQ9NVQ4 179 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 GMPR2Q9P2T1 348 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 POU2F3Q9UKI9 436 aa15.69■□□□□ 0.1
SCAMP4-213ENST00000621748 SH3GLB1Q9Y371 365 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms