RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PM20D2Q8IYS1 436 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 DTX3Q8N9I9 347 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 TRMT10AQ8TBZ6 339 aaKnown RBP12.33□□□□□ -0.44
NEK3-205ENST00000610828 NAT6Q93015 286 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 PMEPA1Q969W9 287 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 C8orf44Q96CB5 159 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 ADAD1Q96M93 576 aaKnown RBP12.33□□□□□ -0.44
NEK3-205ENST00000610828 AGAP4Q96P64 663 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 CTRCQ99895 268 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 KLHDC2Q9Y2U9 406 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
NEK3-205ENST00000610828 A0A0G2JMP0 313 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 A0A0X1KG70 313 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 A8MVM7 634 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 PATE3B3GLJ2 98 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 LAMTOR5O43504 91 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 EIF4EP06730 217 aaKnown RBP12.33□□□□□ -0.44
NEK3-205ENST00000610828 OR8G3PP0DMU2 310 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 RPS27P42677 84 aaKnown RBP12.33□□□□□ -0.44
NEK3-205ENST00000610828 NANOS3P60323 173 aaKnown RBP12.33□□□□□ -0.44
NEK3-205ENST00000610828 SGCBQ16585 318 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 FAM220AQ7Z4H9 259 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 TIGD4Q8IY51 512 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 OR4M2Q8NGB6 313 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 OR6N2Q8NGY6 317 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 IFI44Q8TCB0 444 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 GALNT9Q9HCQ5 603 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
NEK3-205ENST00000610828 TRAV1-2A0A0B4J238 106 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 A0A1B0GVC2 190 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 A6NIN4 97 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 FLRT2O43155 660 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 NPIPB7O75200 414 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 GATBO75879 557 aaKnown RBP12.32□□□□□ -0.44
NEK3-205ENST00000610828 GPANK1O95872 356 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 UCHL1P09936 223 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 INPP1P49441 399 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 RIN1Q13671 783 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 ZNF385CQ66K41 422 aaPredicted RBP12.32□□□□□ -0.44
NEK3-205ENST00000610828 LCN10Q6JVE6 187 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 MISPQ8IVT2 679 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 NUBPLQ8TB37 319 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 HSD17B8Q92506 261 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 CRB3Q9BUF7 120 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 WDR76Q9H967 626 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 CYSLTR2Q9NS75 346 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 LAMP5Q9UJQ1 280 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 ADAM10O14672 748 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 GPRIN2O60269 458 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 GDF9O60383 454 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 OR6A2O95222 327 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 HLA-DQB1P01920 261 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 CD1AP06126 327 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 TACSTD2P09758 323 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 TDGF1P13385 188 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 TMED10P49755 219 aaKnown RBP12.32□□□□□ -0.44
NEK3-205ENST00000610828 ACKR1Q16570 336 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 HSD17B12Q53GQ0 312 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 ZNF684Q5T5D7 378 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 EEF1A1P5Q5VTE0 462 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 DPY19L4Q7Z388 723 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 CDC20BQ86Y33 519 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 UBQLNLQ8IYU4 475 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 YIPF7Q8N8F6 280 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 OR4M1Q8NGD0 313 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 TMEM234Q8WY98 164 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 UBL7Q96S82 380 aaPredicted RBP12.32□□□□□ -0.44
NEK3-205ENST00000610828 SPSB2Q99619 263 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 WDR77Q9BQA1 342 aaPredicted RBP12.32□□□□□ -0.44
NEK3-205ENST00000610828 PRMT8Q9NR22 394 aaPredicted RBP12.32□□□□□ -0.44
NEK3-205ENST00000610828 CLEC4AQ9UMR7 237 aa12.32□□□□□ -0.44
NEK3-205ENST00000610828 TMEM200CA6NKL6 621 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 VSTM2BA6NLU5 285 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 NOTOA8MTQ0 251 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 AKR7A3O95154 331 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 ZFPL1O95159 310 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 AHSA1O95433 338 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 HTR3AP46098 478 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 C17orf67Q0P5P2 114 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 LIPNQ5VXI9 398 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 SLC6A19Q695T7 634 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 CPEB2Q7Z5Q1 589 aaKnown RBP12.31□□□□□ -0.44
NEK3-205ENST00000610828 ORAI1Q96D31 301 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 GFM1Q96RP9 751 aaKnown RBP12.31□□□□□ -0.44
NEK3-205ENST00000610828 NPAS1Q99742 590 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 AKIRIN1Q9H9L7 192 aaPredicted RBP12.31□□□□□ -0.44
NEK3-205ENST00000610828 NOX4Q9NPH5 578 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
NEK3-205ENST00000610828 IKZF2Q9UKS7 526 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 VDAC3Q9Y277 283 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
NEK3-205ENST00000610828 AK6Q9Y3D8 172 aaKnown RBP12.31□□□□□ -0.44
NEK3-205ENST00000610828 ACOD1A6NK06 481 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 ZNF879B4DU55 563 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 MEN1O00255 615 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 CCNKO75909 580 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 KRT8P05787 483 aa12.3□□□□□ -0.44
NEK3-205ENST00000610828 EPXP11678 715 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms